Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01480 ATGTGGCTGACTGGCAGGCTTCAACTAGGAATCATTCTTTGCTCAGAAGAGTGGGAATCATCCACCTCTTCTTGTGTTCGTGACATATTGGCACAACTTTGGATTGTTACTTCTACGCTCTGGGCATTGATGTCATTTATCTGTGGGCTTCCTATACTTGAGTGTGTTTATTGTCTAGCCTGTGCTCGTTGGGTTTGGAAAAAATGTCTGTACACTGCAGGCTATGAGAGTGAAAATTGGGGCCTGGCTAGTCCAGAAGAATTTGAGCCTGTACCTCGAATTTGTCGTGTAATCTTATCCGTGTATGAAGAAGATATTCGTAACCCCCAATGGGCTCCTGAAGGAGGTTATGGAATTAATCCTGACTGGATTATATTGCGTAAGGATTATGGCGATAATCGAGGCTGTGTTACTCCATACATGATATACCTTGATCATGATCATGCCGAAATTATACTGGCTGTTAGTGGACTCAATTTAGCGAAGGAAAGTGATTATGTAGTTTTGCTTGATAACAAACTGGGACAGACAGAATTTCAAGGTGGTTATGTTCATAATGGGTTATTGAAGGCAGCAGAATGGGTTTTTGATGCAGAACATGAGGTTCTCAGGAAGCTCATGGCTGAAAATCCAACTTATATGCTCACATTTATTGGACACTCTCTAGGGGCTGGGGTGGTGGCATTGTTGACAATGCTAGTGCTTCATAATCGAGACAAATTGGGAATACAGAGAAACAAGATAAGATGCTATGCGATAGCTCCTGCTCGATGCATGTCTCTCAATTTGGCTGTAAGATATGCAGATGTGATCAGTTCCATCGTACTTCAGGATGATTTTTTACCTCGGACAACCACTGCTCTACAAGATGTCTTCAAGTCACTTTTATGTTGGCCCTGTTTATTGTGTCTTCTGTGCTTAAAGGATACTTGCACACTGGAGGAGAAGAAGCTTAGAGATCCAAGGCGTTTGTATGCACCTGGCCGTCTATATCACATTGTGGAGCGAAAGCCCTTCAGGTTTGGAAGATTTCCGCCTGTTGTCAGGACAGCAGTACCCGTTGATGGGAGATTTGATCATATAGTTCTTTCTTGCAATGCAACTTCTGACCATGCCATCCTTTGGATAGAGAGGGAATCCCAATGGGCTCTCGATTTAATGGTAGAGAAAGATCGGCGCATGGAGATTCCAGCAAGGCAGAGAATGGAGAGGCATGAGTCACTAGCTCGAGAACACAGTGAAGAGTACCACGCAGCCCTTCAGAGGGCAGTTGCTTTGGATATTCCTCAAGCATATTTACCTTCCTCATATGGAACATTTCATGAAATGGATGTTGGGGAGGATTCTGGAAGATCAAGTGCTAAAGACTCCCCCTTGTCTTCTAATAAACGAACAGAAAGTTGGAATGAATTTGTTGGGCGCCTGTTTGATGTGGATAAATCAGGTCATATGGTGTTCAAGAAGACATATCCGTAA 1476 0.4336 MWLTGRLQLGIILCSEEWESSTSSCVRDILAQLWIVTSTLWALMSFICGLPILECVYCLACARWVWKKCLYTAGYESENWGLASPEEFEPVPRICRVILSVYEEDIRNPQWAPEGGYGINPDWIILRKDYGDNRGCVTPYMIYLDHDHAEIILAVSGLNLAKESDYVVLLDNKLGQTEFQGGYVHNGLLKAAEWVFDAEHEVLRKLMAENPTYMLTFIGHSLGAGVVALLTMLVLHNRDKLGIQRNKIRCYAIAPARCMSLNLAVRYADVISSIVLQDDFLPRTTTALQDVFKSLLCWPCLLCLLCLKDTCTLEEKKLRDPRRLYAPGRLYHIVERKPFRFGRFPPVVRTAVPVDGRFDHIVLSCNATSDHAILWIERESQWALDLMVEKDRRMEIPARQRMERHESLAREHSEEYHAALQRAVALDIPQAYLPSSYGTFHEMDVGEDSGRSSAKDSPLSSNKRTESWNEFVGRLFDVDKSGHMVFKKTYP* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01480 491 CDD Lipase_3 87 283 - -
Rops4g01480 491 SUPERFAMILY alpha/beta-Hydrolases 84 286 IPR029058 -
Rops4g01480 491 MobiDBLite consensus disorder prediction 443 463 - -
Rops4g01480 491 Gene3D alpha/beta hydrolase 85 294 IPR029058 -
Rops4g01480 491 Pfam Lipase (class 3) 162 285 IPR002921 GO:0006629
Rops4g01480 491 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 44 488 - -
Rops4g01480 491 Pfam Lipase 3 N-terminal region 53 117 IPR005592 GO:0016042
Rops4g01480 491 Coils Coil 402 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01480 Rops-Chr4 37521261 37527747 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01480 44 488 Miscellaneous Gene Families AT4G00500 65.256 0.0 596
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01480 - - gmx:100800227 783.867