Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01465 ATGACGAGATGGATTTTCTTCTCCATCATCATCCTGGTTGCATTTGTTGCAAGCTCTTTCATCTTGGAAATTGACCTTTCCAAAATAACAAGCAGTTCTATTCTCAAGACAATTATAGTCTTCAATAAGCAACAAGAACAATTCCCCTTGAACTGCATCAATGGAAACTCAGGACAAACCTGCCCAGCATACTACCCAACAAAATTTGAACTTGATGATGATTCATCATCAGTTACATCATGTCCAGATTACTTCAAATGGATCCATGAAGATCTAAAACCATGGGAAAGTACAGGAATCACAAGGGATATGATAGAAAGAGGAAAAAATATTTCACACTTTAGGCTTGTGGTTGTAAATGGAAAAGCTTATTTAGAAAGGCATGCCAAATCATTTCAGACAAGGGATGTGTTCACAATATGGGGAATTTTACAACTTCTAAGGCTATACCCAGGAAAGATACCAGATTTGGAGCTAATGTTTCAGTGTGGGGATAAGACTGTGGTGAACAAAAGAGCTTTCCAAGGACCACAAGCCATGTCACCTCCACCTGTGTTCCATTATTGTGGAGAGGAAACTTCATATGACATTGTCTTCCCTGATTGGACCTTCTGGGGTTGGGCTGAGCTCCACATAAGACCATGGGAAACAACATTAAAGAATATACAAGAAGGCAACAAGATGGTCAAATGGAAGGATAGGGTACCCTATGCTTTTTGGAAGGGCAACCCAAAAGTGTCTAAAATTAGGACAGAACTCGGCAAGTGCAATGCCTCAGACCAACATGATTGGAATGCCCGAATATATAGCATACAATGGCAAGAGGAGAAAACGAAAAATTTCCAGAACTCAAGACTAGAAGATCAATGTACCTACAGGTACAAGATTTATGCAGAAGGGTCCACATGGTCTGTGAGTGAAAAGTACATAATAGCATGTGACTCCATGACCATGTTTATAGAGCCTAGGTACTATGACTTCTTTACAAGAAGCATGGTACCTTTGCAGCACTACTGGCCTATCAGTGTCAAAAACATGTGTGAAGAGATTAAGTATGCAGTGGATTGGGGCAATGCTCACCTTGACAGGGCACAGGCGATTGGCAAAGGAGGAGCAGACTACATCATAGAGAATTTAAAGATGAAGTTTGTGTATGATTACATGTTTCATCTATTAAATAGTTATGCAAAGCTCATGAGATTCAAACCAACTATACCTGAAGGAGCTGTTGAGATTTGTTCTGAAAGTATTGCATGTTCCCTGCGTGGTGCAAGGAAGCATTACATGGTTGAGTCCATGGTGATGTCACCAAGTGACACACCTCCATGTACAATGCCTCCTCCTTATACAACTGAAACTCTCAAAGAGTTTCTAAACTCTCAAAGAGTTTCTACAGGAAAATGA 1404 0.4024 MTRWIFFSIIILVAFVASSFILEIDLSKITSSSILKTIIVFNKQQEQFPLNCINGNSGQTCPAYYPTKFELDDDSSSVTSCPDYFKWIHEDLKPWESTGITRDMIERGKNISHFRLVVVNGKAYLERHAKSFQTRDVFTIWGILQLLRLYPGKIPDLELMFQCGDKTVVNKRAFQGPQAMSPPPVFHYCGEETSYDIVFPDWTFWGWAELHIRPWETTLKNIQEGNKMVKWKDRVPYAFWKGNPKVSKIRTELGKCNASDQHDWNARIYSIQWQEEKTKNFQNSRLEDQCTYRYKIYAEGSTWSVSEKYIIACDSMTMFIEPRYYDFFTRSMVPLQHYWPISVKNMCEEIKYAVDWGNAHLDRAQAIGKGGADYIIENLKMKFVYDYMFHLLNSYAKLMRFKPTIPEGAVEICSESIACSLRGARKHYMVESMVMSPSDTPPCTMPPPYTTETLKEFLNSQRVSTGK* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01465 467 PANTHER KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED 56 455 - -
Rops4g01465 467 Pfam Glycosyl transferase family 90 77 462 IPR006598 -
Rops4g01465 467 SMART cap10 153 402 IPR006598 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01465 Rops-Chr4 37178087 37187230 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01465 - - gmx:100813234 786.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g01465 4 37178087 37187230 Rops4g01465 4 37178087 37187230 ECH