Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01421 ATGGCGGCGAAACCTTCTTCCTCGCCGGAAAGTGTGGTTGCCTCGCCATCACTGAAAATCTCGAAGGAAGTGGACCCTCGTCATGCTTCTGACACCCTTTGGTTCGTTAACAATATGGGGGGTGGTATCCCCGTTCCTGATAACTGCAACACGCATGGCTTCTTCGATGGATTCCTTAGGAGTTTCATCAAGGTTGATCACATCCAAAGGGGACGAATCTCTTGCACTATTGTCGCCAAACCACCAATCTGTAATGGCTATGGAACCCTTCATGGAGGGTCTGTTGGGTCCTTGGTTGATGTTCTGTCAACTGCTTGTGCTAGAACTGTAGTTTCTGAGGACAAAGAACTTTTTCTTGGGGAAATGAGCATATCTTATCTCTCTGCGACTCCAATGAATGAAGAAGTGCGAGCTAATGCCTCCGTGGTGAAGACAGGAAGAAATTTGACTGTAGTTTCTCTTGAGTTTAGACTGAAGAAAACTGGGAATTTGGTCTATATGACTCGTGCTACCTTCTATAACATGCCAGTTGCCAGTTTATGA 543 0.4604 MAAKPSSSPESVVASPSLKISKEVDPRHASDTLWFVNNMGGGIPVPDNCNTHGFFDGFLRSFIKVDHIQRGRISCTIVAKPPICNGYGTLHGGSVGSLVDVLSTACARTVVSEDKELFLGEMSISYLSATPMNEEVRANASVVKTGRNLTVVSLEFRLKKTGNLVYMTRATFYNMPVASL* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01421 180 FunFam Putative esterase F42H10.6 43 175 - -
Rops4g01421 180 NCBIfam hotdog fold thioesterase 63 155 IPR003736 -
Rops4g01421 180 CDD PaaI_thioesterase 63 173 - -
Rops4g01421 180 Pfam Thioesterase superfamily 87 161 IPR006683 -
Rops4g01421 180 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 63 174 IPR029069 -
Rops4g01421 180 Gene3D Hotdog Thioesterase 46 176 - -
Rops4g01421 180 PANTHER THIOESTERASE SUPERFAMILY MEMBER-RELATED 50 176 IPR039298 GO:0047617
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01421 Rops-Chr4 36474766 36478507 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01421 K17362 - gmx:100499764 284.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g01421 4 36474766 36478507 Rops4g01421 4 36474766 36478507 ECH