Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Rops4g01416 | ATGGAGGGAAAACCACATGCACGCACCTTAGAGATCACAGTTATATCTGGAGAGAACATACACGTGGATCAAAGTTCAATGGCAGAGAACATGTATGTTGTTGTTCGTGCCGAGTCTCTCAGCTGCTGCACCACCAAAATGGTGAAGGAAGATAAGGGTTTGGTTGCATGGAACGAGAAATTCTTGTTAGACATTCCCACGTATGCAAGGTCAGTGACATTTGAGGTTCAGTGCAAGAAGTATAGGGGGACTCGCCCTATTGGGGTGGCAAGGATTGCGCTTTCGGATTTTCTTTGTGGCAGTAATGGGTCGGAAAGTGGCCTTCAAAAAATGATGAGTTATGGTCTGAGGGATTGGGATGGCAGAAGAAATGGGGTTATTCATTTCTCGGTGAGGGTGGTGACACCACAGGACCATTCTTGTGAAGAAACGAAACCAGTGAAGGGAACAAAGACGGTGAGTTCTTGTGGATTTGAACCTAATGAGGTTATGGGGTTTCAGAAGAAGAATTCAGGTCATGTTGTTATTGGAATTCCAGTTTGGTGGAATTACCCTGGCAATATTTGA | 567 | 0.4497 | MEGKPHARTLEITVISGENIHVDQSSMAENMYVVVRAESLSCCTTKMVKEDKGLVAWNEKFLLDIPTYARSVTFEVQCKKYRGTRPIGVARIALSDFLCGSNGSESGLQKMMSYGLRDWDGRRNGVIHFSVRVVTPQDHSCEETKPVKGTKTVSSCGFEPNEVMGFQKKNSGHVVIGIPVWWNYPGNI* | 189 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Rops4g01416 | 188 | ProSiteProfiles | C2 domain profile. | 1 | 107 | IPR000008 | - | |
| Rops4g01416 | 188 | Gene3D | C2 domain | 7 | 134 | IPR035892 | - | |
| Rops4g01416 | 188 | SMART | C2_3c | 9 | 106 | IPR000008 | - | |
| Rops4g01416 | 188 | Pfam | C2 domain | 9 | 99 | IPR000008 | - | |
| Rops4g01416 | 188 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 4 | 135 | IPR035892 | - | |
| Rops4g01416 | 188 | PANTHER | INGRESSION PROTEIN FIC1 | 6 | 147 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Rops4g01416 | Rops-Chr4 | 36411237 | 36425370 | Dispersed/Tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Rops4g01416 | - | - | gmx:100810274 | 234.958 |