Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01407 ATGGGATTAAGCTCACGCACGCTAGAGATAACTGTTATATCTGGCGAAAACCTTAATGTAACAGAGGACGCATACGTCGTCGTTCGGGCTGAGTCCCTCAACTGCTGCACCACCAACATGACCAAAGACAATGGTGGATTCCTTTCGTGGAATGAGAAGTTCTTGCTGGACATGCCCGCATATGCAAGGTCCATCACGTTCGAGGTTCAATGCAACAAGTTCAAGGCTGCTCGACCAGTTGGGATTGCCAGAATCGCAGTTTCCGATTTTCTGGGCGGTGCTGTGCCGGAAACTTCCTTGCAGGTTTTGAGTTACAGGTTGAGAGACTGGGAAGGGAGGCGAAATGGGGTTATTCATTTTGCGGTGAGGATGCCGGCGCCGGAGGAATGCTCCATTTCCACGTCGGAACCGCTGAAGGGAACGAAGGATTCTGGTGACCATTTCACCGGAATCCATGTTGGGAGCAAGAACTCTAATGGAATTGTTACCGGGGTTCCATTTTGGTGGCATTGCCCTAACATTATTTAA 528 0.4981 MGLSSRTLEITVISGENLNVTEDAYVVVRAESLNCCTTNMTKDNGGFLSWNEKFLLDMPAYARSITFEVQCNKFKAARPVGIARIAVSDFLGGAVPETSLQVLSYRLRDWEGRRNGVIHFAVRMPAPEECSISTSEPLKGTKDSGDHFTGIHVGSKNSNGIVTGVPFWWHCPNII* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01407 175 CDD C2_SRC2_like 7 120 IPR044750 GO:0006952
Rops4g01407 175 PANTHER INGRESSION PROTEIN FIC1 6 134 - -
Rops4g01407 175 SMART C2_3c 7 99 IPR000008 -
Rops4g01407 175 Pfam C2 domain 7 98 IPR000008 -
Rops4g01407 175 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 124 IPR035892 -
Rops4g01407 175 ProSiteProfiles C2 domain profile. 1 100 IPR000008 -
Rops4g01407 175 Gene3D C2 domain 5 125 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01407 Rops-Chr4 36167906 36168580 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01407 - - gmx:100810797 238.039