Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Rops4g01406 | ATGGGGTTAAGCTCACGCACGCTAGAGATAACTGTTATATCTGGCGAAAACATTAACTTGACCGAAGATGCATACGTCGTCGTTCGGGCTGAGTCCCTCAAATGCTGCACCACCAGCTTGACCAAAGACAATGGTGATGGATTCCTTTCGTGGAACCAGAAGTTCTTGCTCGACTTGCCCGCATATGCAAGGTCCATCACGTTTGAGGTTCAATGCAACAAGTTCAAGGGTGCTCGACCTGTTGGGGTTGCCAGAATCACTGTTTCAGATTTTCTGGGTGGCGATGTGCCGGAATGTTCGTTGCAGGTTTTGAGTTACAGGTTGAGAGATTGGGAAGGGAGGAGAAATGGGGTTATTCATTTCGCGGTGAGAGTGGCGGCGCCGGAGGAATGCTCCATTTCCACTGTGGAACCGGTGAAGGGAACGAAGGATTTGGGTGACCGATTCACCGGAATCCATGTGGGCGACAAGAACTCTAGTGGGGTTGTTACCGGTGTTCCATTGTGGTGGAATTGTCCTATTGTTATTTAA | 531 | 0.4953 | MGLSSRTLEITVISGENINLTEDAYVVVRAESLKCCTTSLTKDNGDGFLSWNQKFLLDLPAYARSITFEVQCNKFKGARPVGVARITVSDFLGGDVPECSLQVLSYRLRDWEGRRNGVIHFAVRVAAPEECSISTVEPVKGTKDLGDRFTGIHVGDKNSSGVVTGVPLWWNCPIVI* | 177 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Rops4g01406 | 176 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 7 | 128 | IPR035892 | - | |
| Rops4g01406 | 176 | PANTHER | INGRESSION PROTEIN FIC1 | 6 | 129 | - | - | |
| Rops4g01406 | 176 | CDD | C2_SRC2_like | 7 | 121 | IPR044750 | GO:0006952 | |
| Rops4g01406 | 176 | Gene3D | C2 domain | 5 | 125 | IPR035892 | - | |
| Rops4g01406 | 176 | Pfam | C2 domain | 7 | 96 | IPR000008 | - | |
| Rops4g01406 | 176 | ProSiteProfiles | C2 domain profile. | 1 | 101 | IPR000008 | - | |
| Rops4g01406 | 176 | SMART | C2_3c | 7 | 100 | IPR000008 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Rops4g01406 | Rops-Chr4 | 36151343 | 36152065 | Tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Rops4g01406 | - | - | gmx:100810797 | 239.965 |