Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01369 ATGGCAGATCAACCAGAAGGAACACTCCAGAACATTCTGGAACAAGAATCTCTGAAGTGGGTCTTCGTTGGTGGCAAAGGTGGTGTTGGAAAAACCACTTGCAGTTCCATTCTCTCGATCCTTCTTTCCACCGTTCGTTCCTCTGTCCTCATAATCTCAACCGACCCTGCTCACAATCTCAGTGATGCTTTTCAACAACGCTTCACAAAGACCCCAACTTTGGTCAATGGCTTCTCCAATCTCTATGCCATGGAGGTGGATCCTAACGTGGAGCATGAGGATATGGGTGGTTCTGATGGGATGGATAGTTTGTTCTCTGAGTTAGCTGGTGCAATTCCCGGAATTGATGAGGCCATGAGCTTTGCTGAGATGCTCAAATTGGTGCAGACAATGGATTATTCTGTTATTGTATTTGATACTGCTCCCACTGGCCACACACTCAGACTGTTGCAATTCCCATCAGTTTTAGAAAAGGGTCTTGCGAAGATGATGTCTTTGAAAAGTAAATTTGGTGGTTTGTTTACTCAGATGACTCGCATGTTTGGCATGGGTGATGATTTTGGTGATGATGCAATTCTTGGGAGAATTGAAGGCATGAAGGATGTGATCGAACAAGTTAATAAGCAATTCAAGGATCCAGATATGACAACCTTTATTTGTGTTTGCATTCCCGAATTCCTCTCACTTTATGAAACTGAGAGATTGGTTCAGGAACTTACAAAGTTTGAGATTGACACACACAATATCATCATTAATCAAGTAATCTTTGACGATGAAGAGGTTGAATCCAAGTTACTTAAGGCAAGAATGAAAATGCAACAGAAGTATCTGGACCAGTTTTACATGTTGTATGATGACTTTAACATCACCAAGCTGCCACTGCTCCCAGAAGAGGTTACTGGTGTTGAAGCTCTGAAAGCATTTTCAAGACATTTTACATCACCATATCAACCCTCATCAAGTACAGACCCTTTAGAACGGTTAGAGCGTAGAGTATCAGCACTACAACGCCAGTTAAAAGAGACTGAAGAAGAATTGGACAGACTCAAAAGGGGGAAGCACAAGGCTTGA 1071 0.423 MADQPEGTLQNILEQESLKWVFVGGKGGVGKTTCSSILSILLSTVRSSVLIISTDPAHNLSDAFQQRFTKTPTLVNGFSNLYAMEVDPNVEHEDMGGSDGMDSLFSELAGAIPGIDEAMSFAEMLKLVQTMDYSVIVFDTAPTGHTLRLLQFPSVLEKGLAKMMSLKSKFGGLFTQMTRMFGMGDDFGDDAILGRIEGMKDVIEQVNKQFKDPDMTTFICVCIPEFLSLYETERLVQELTKFEIDTHNIIINQVIFDDEEVESKLLKARMKMQQKYLDQFYMLYDDFNITKLPLLPEEVTGVEALKAFSRHFTSPYQPSSSTDPLERLERRVSALQRQLKETEEELDRLKRGKHKA* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01369 356 Hamap ATPase <gene_name> [GET3]. 5 320 IPR027542 GO:0005524|GO:0016887
Rops4g01369 356 FunFam ATPase ASNA1 1 321 - -
Rops4g01369 356 CDD ArsA 34 309 - -
Rops4g01369 356 PANTHER ARSENICAL PUMP-DRIVING ATPASE ARSENITE-TRANSLOCATING ATPASE 10 340 IPR016300 GO:0005524|GO:0016887
Rops4g01369 356 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 16 308 IPR027417 -
Rops4g01369 356 Gene3D - 1 327 IPR027417 -
Rops4g01369 356 NCBIfam TRC40/GET3/ArsA family transport-energizing ATPase 22 310 IPR016300 GO:0005524|GO:0016887
Rops4g01369 356 Coils Coil 325 356 - -
Rops4g01369 356 Pfam Anion-transporting ATPase 19 311 IPR025723 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01369 Rops-Chr4 35617402 35622713 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01369 K01551 - gmx:100788968 612.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g01369 4 35617402 35622713 Rops4g01369 4 35617402 35622713 ECH