Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01357 ATGGCGTCAAAACGAGGGCTTCACTTTGCCAAGAATGGAAGCAAAGGATCTTGTTTCCCTGTTCTGTGTTTCGTTCTCCTTTGTGTTCTTGTACCTGTGGTTTTCTTCCTCGGTAGGGGGCTTCACACTGCGGATCAATTTGAAATTTCAGCTGTTCCAAGTAAACAGGTTGCCAAATGGACAGAATGGCAGACATTGCAAGACCTTAAATCACTTTTTTCGAAAGAGGTTCTTGATTTTATTGTATCCAGCACAAATGATACGGGGCCTTTGAGTCTCGACAATTTCAGAAAAAATAATTTGTCTGCTTCATGGAGAGTTGTTGGATTAGAGATTTCAAATACTACATATGAGATTAACCAACCAACAACACATGTTAGACAAGAAAAACCAAAGGTGAAGGAAGGCAGATCTTCAGAGGGTATTGCTCAGTGGACTGGTAGTCCTGCACAGCAAGTCCGAAGGCAATTAATAGATAAAAGACGGGAAAAGCGTGCTGCTGAGTTGGTAAAACTGGATAATGAAGTGATTGTAAAACTTGAAAATGAAGCCATTGAACGCTCAAAATCTGTTGAATCAGCTGTTCTTGGTAAATACAGCATTTGGAGGAAAGAAATTGAGAATGAAAATGCTGATTCTAATGTTCGGTTGATGCGGGACCAGATCATTATGGCTAGGGTATATGGAAGCATTGCAAAGATGAAGAACAAGCTTGAACTGTACCAAGAACTGCAATCTCGGCTCAAAGAAAGTCAACGTGCTTTAGGTGATGCAATTTCTGATGCGGATCTACATCACAGTGCGCATGAAAAACTAAAGGCTATGGGCCAAGTTCTGTCAAAAGCAAGAGAGCAATTGTATGACTGCAAGTTGGTCACTGGAAAACTGAGAGCAATGCTACAAACAGCTGATGAGCAAGTTAGGAGCTTGAAGAAACAAAGCACATTCCTCAGTCAGTTGGCTGCCAAGACCATACCAAATGGAATCCATTGCTTATCTATGCGTCTTACCATAGATTACTACCTCCTTCCTCCTGAAAAGAGAAATTTCCCTAGGAGTGAAAACTTGGAGAATCCCAGTCTTTATCATTATGCACTGTTTTCAGACAATGTCTTGGCTGCATCTGTTGTTGTCAACTCAACTATTATGAATGCAAAGGATCCTTCGAAGCATGTTTTTCACCTTGTTACTGATAAACTAAATTTTGGAGCCATGAACATGTGGTTTCTTTTGAACCCTCCTGGAAAAGCTACAATCCATGTTGAAAATGTTGATGATTTTAAGTGGTTGAACTCATCCTACTGCCCTGTCTTGCGGCAGCTTGAATCTGCAACAATGAAAGAGTATTATTTCAAGGCAGGCCATCCAACCACACTTTCCTCTGGTGCTTCCAATTTGAAGTATAGAAACCCAAAATATCTCTCAATGCTCAACCATCTGAGATTCTATCTTCCACAAGTTTATCCAAAATTGAACAAAATCCTTTTTCTCGATGATGACATTGTTGTCCAGAAGGATTTGACTGGATTATGGGCAGTGAATCTTCAGGGGAAAGTAAATGGAGCAGTTGAAACATGCGGTGAGAGCTTTCACCGATTTGACAAGTATCTTAATTTTTCAAATCCACATATTGCAAGAAATTTCAATCCAAATGCTTGTGGTTGGGCATACGGAATGAACATATTCGATCTGAAGGAGTGGAAAAAGAAGGATATCACCGGCATATATCACAAGTGGCAGAATATGAATGAAGACAGGGTGCTGTGGAAGCTGGGGACTTTGCCTCCAGGGCTAATGACATTCTATGGCCTGACACATCCGCTAAATAAATCATGGCATGTACTTGGTTTGGGTTATAATCCAAATGTAGATCGATCAGAGATTGAGAATGCAGCAGTTGTACACTACAATGGTAATATGAAGCCTTGGTTAGAGATTGCCATGACAAAGTACCGGCCTTACTGGACTAAATATGTCAAATACAATCATCCCTATCTTCGGAACTGTAAGTTAAATGCATAG 2022 0.4045 MASKRGLHFAKNGSKGSCFPVLCFVLLCVLVPVVFFLGRGLHTADQFEISAVPSKQVAKWTEWQTLQDLKSLFSKEVLDFIVSSTNDTGPLSLDNFRKNNLSASWRVVGLEISNTTYEINQPTTHVRQEKPKVKEGRSSEGIAQWTGSPAQQVRRQLIDKRREKRAAELVKLDNEVIVKLENEAIERSKSVESAVLGKYSIWRKEIENENADSNVRLMRDQIIMARVYGSIAKMKNKLELYQELQSRLKESQRALGDAISDADLHHSAHEKLKAMGQVLSKAREQLYDCKLVTGKLRAMLQTADEQVRSLKKQSTFLSQLAAKTIPNGIHCLSMRLTIDYYLLPPEKRNFPRSENLENPSLYHYALFSDNVLAASVVVNSTIMNAKDPSKHVFHLVTDKLNFGAMNMWFLLNPPGKATIHVENVDDFKWLNSSYCPVLRQLESATMKEYYFKAGHPTTLSSGASNLKYRNPKYLSMLNHLRFYLPQVYPKLNKILFLDDDIVVQKDLTGLWAVNLQGKVNGAVETCGESFHRFDKYLNFSNPHIARNFNPNACGWAYGMNIFDLKEWKKKDITGIYHKWQNMNEDRVLWKLGTLPPGLMTFYGLTHPLNKSWHVLGLGYNPNVDRSEIENAAVVHYNGNMKPWLEIAMTKYRPYWTKYVKYNHPYLRNCKLNA* 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01357 673 Coils Coil 231 261 - -
Rops4g01357 673 SUPERFAMILY Nucleotide-diphospho-sugar transferases 362 670 IPR029044 -
Rops4g01357 673 CDD GT8_like_1 362 660 - -
Rops4g01357 673 Pfam Glycosyl transferase family 8 331 647 IPR002495 GO:0016757
Rops4g01357 673 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 364 668 IPR029044 -
Rops4g01357 673 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 162 671 IPR029993 GO:0047262
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01357 Rops-Chr4 35280399 35288122 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01357 1 672 Glycosyltransferase AT3G61130 75.592 0.0 1051
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01357 K13648 - gmx:102664546 1155.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g01357 4 35280399 35288122 Rops4g01357 4 35280399 35288122 ECH