Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01355 ATGTATGCTTTTGAATCACTACACTCTCACAAGTACACTCTCCTCAAAGCCTTCCACTCTCAACTCCCTCTCCATCAATTTCTCACTTCTCACAACACCAAACCTTCATCCATTCGAGCCATTATCTGCAACCTGCGGCAGCCACTCATCGTTGATGTCCTCCGCCTCCTCCCGTCGCTCGGCCTCGTCGTCACCACCAGCGCTGGAACCGAGCACATCGATTTGCACGAGTGCCGCCGTCGTGGTGTTAAGGTTTTCACCGCCTCAGGTCTGTTCGCCGAGGATGTCGCCGACATGGCCGTTGGCTTGTTGATCGATGTGCTTTTCAAAATCTCCGCCGCTAATCGAAATCTCAGGAAATCGGTTCCGTTGAATCTTCCTCTTTGCTTTAAGCTGGGAGGCAAGAGAGTTGGGATTGTTGGATTGGGAAGAATTGGTATGGAAGTTACTAAAAGGGAAGTGATGTTGGCATTGGGGAAAGATGGGGTTATTGTCAATGTTGGACGAGGAGCTCTAATTGATGAAAAGGAATTGGTAAAGTGTTTGATGGAAGGGGAGATAGGAGGTGCTGGTTTGGATGTGTTTGAGAATGAGCCTAATGTTCCTAAAGAGTTCTTTCATTGGATAATGTTGTCCTATCACCACATGCTGCTGCACAAACACAAGAGTCTTTCAATAATAAATGTGAAGTTGTAG 696 0.4727 MYAFESLHSHKYTLLKAFHSQLPLHQFLTSHNTKPSSIRAIICNLRQPLIVDVLRLLPSLGLVVTTSAGTEHIDLHECRRRGVKVFTASGLFAEDVADMAVGLLIDVLFKISAANRNLRKSVPLNLPLCFKLGGKRVGIVGLGRIGMEVTKREVMLALGKDGVIVNVGRGALIDEKELVKCLMEGEIGGAGLDVFENEPNVPKEFFHWIMLSYHHMLLHKHKSLSIINVKL* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01355 231 PANTHER 2-HYDROXYACID DEHYDROGENASE-RELATED 152 214 - -
Rops4g01355 231 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 154 205 IPR006140 GO:0051287
Rops4g01355 231 Gene3D - 93 151 - -
Rops4g01355 231 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 93 206 IPR036291 -
Rops4g01355 231 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 36 119 - -
Rops4g01355 231 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 133 IPR006139 GO:0016616|GO:0051287
Rops4g01355 231 Gene3D - 13 92 - -
Rops4g01355 231 Gene3D - 152 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01355 Rops-Chr4 35229908 35232636 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01355 - K15919 lang:109340199 248.054
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g01355 4 35229908 35232636 Rops4g01355 4 35229908 35232636 ECH