Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01354 ATGGTGGCCCACAACCACCACCCTTCATCAATTTCTGCCATACTCTCCGGCAAAGCCTACCCTGTCACCGCCGACGTCCTCTGCCTCCTCCCGTCGCTCCGTCTCATCATCATCCCCGGTGTCGGAACAGACCACATTGACCTGTCTGAGTGCCACCGCAGAGGAATCCAGGTCGCCGGTGCCGGAAACCTGTTCTCCGATGATGTCGCCGATATGGCGGTGGCTTTGTTGATCGACGTGAATTGGAAAATTTCCGCGGCGGATCGGTATTTGAGAAGACGGCTTCACCCTGCTTCATGGGATTTTCCACTTGCTTCTTCCAGGTTGACGGGAAAGAAAGTCGGAATTGTTGGTTTGGGAAAAATTGGCTTAGAAGTGGCACATAGGCTTGAGGCGTTCGGTTGCATTATATTATACAACTCTCGGAGCCAAAAACCATTTGTTTCATACCCTTTTTATTCCACTGTTGTTGAGCTTGCCATTGATAGCAATGTACTCATTCTCTGTTGTGAGCTGAACAACCAAACAAGGCACATTATCAACAGAGAAGTGATGTTGGCATTGGGAAAACAAGGAGTTATAGTGAATGTTGGAAGAGGGGCTCTCATAGATGAAAAGGAATTGTTAAGGTGTTTGATGAAAGGGAAAGTTGGAGGTGCTGGTTTGGATGTGTTTGAGAATGAACCTCATGTTCCTAAAGAGTTCTTTTCCTTGGATAATGTGGTTCTATCACCACATGCAGCTTTCTTGACGTCAAAGTCTTACATGGGTATTTGCCAACTTTTGGAACGCAATTTGGAAGCCTTCTTCTCAAATAAGCCTTTGATTACTCCAGTGATAATAGATTCAACTCAGTAA 858 0.4615 MVAHNHHPSSISAILSGKAYPVTADVLCLLPSLRLIIIPGVGTDHIDLSECHRRGIQVAGAGNLFSDDVADMAVALLIDVNWKISAADRYLRRRLHPASWDFPLASSRLTGKKVGIVGLGKIGLEVAHRLEAFGCIILYNSRSQKPFVSYPFYSTVVELAIDSNVLILCCELNNQTRHIINREVMLALGKQGVIVNVGRGALIDEKELLRCLMKGKVGGAGLDVFENEPHVPKEFFSLDNVVLSPHAAFLTSKSYMGICQLLERNLEAFFSNKPLITPVIIDSTQ* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01354 285 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 66 249 IPR036291 -
Rops4g01354 285 Gene3D - 7 274 - -
Rops4g01354 285 PANTHER 2-HYDROXYACID DEHYDROGENASE-RELATED 4 275 - -
Rops4g01354 285 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 74 248 IPR006140 GO:0051287
Rops4g01354 285 Gene3D - 66 251 - -
Rops4g01354 285 FunFam Putative 2-hydroxyacid dehydrogenase 66 251 - -
Rops4g01354 285 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 13 279 IPR006139 GO:0016616|GO:0051287
Rops4g01354 285 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 11 95 - -
Rops4g01354 285 CDD HPPR 7 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01354 Rops-Chr4 35215171 35218227 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01354 K15919 - gmx:100777313 394.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g01354 4 35215171 35218227 Rops4g01354 4 35215171 35218227 ECH