Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01353 ATGGCAGATCAAAACCACAACACCACTCAACAACTCCCCAAAGTCCTTTACTATGGTCCTTCAGGATTTTCTTCCTTCCTCAAACCACATCCTTCTCACAACTTTCACATCCTTAACCCTTCCCCTCTCTCTCTTCACCAATTCTTAGCCACTCACCCCCACCACCTCTCCTCCGTCGCCGCCCTATACTCCATCGGCTGCTACCCCGTCAACGCCGACGTCCTCCAACTTCTCCCCTCGCTCCGTCTCGTCGTCACCGCCAGCGCCGGGACCGATCACATTGACTTGTCTGAGTGCCGCTTACGAGGAATCCAGGTTGCCGGCGCCGGAAACCTGTTCTCCGAAGATGTCGCTGACATGGCGGTGGCTTTGTTGATCGACGTGATCAGGAGAATTTCGGCGGCGGATCGGTATTTGAGAAGACGGCTTCATCCTGTTTCATTGGATTTTCCACTTGCTTCTTCCAAGTTGACTGGAAGGAAAGTTGGAATTGTGGGTTTGGGAAAAATTGGCTTAGAAGTGGCACACAGACTTGAAGCATTTGGTTGCATTATATCATACAACTCTAGGAACAAAAAACCATTTGTTTCATACCCTTTTTATTCCAGTGTTGTTGAGCTTGCCACTGAAAGCAATGTACTTATTCTATGTTGTGAGCTGAACAACCAAACAAGGCACATTATCAACAGAGAAGTTATGTTGGCATTGGGAAAAGAAGGAGTTATAGTGAATGTTGGAAGAGGGGCTCTTATAGATGAGAAGCAATTGGTTAAGTGTTTGATGAAAGGGGAAGTTGGAGGTGCTGGTTTGGATGTGTTTGAGAATGAACCTCATGTTCCTAAAGAGTTCTTTTCATTGGATAATGTTGTTCTATCACCACATGCAGCTGTGGTGACATCAGAGTCTTACAAGGCTATTTGTCAACTTGTGGAAAGAAATTTGGAGGCCTTCTTCTCAAATAAGCCTCTGATTACTCCAGTGATAATAGATTGA 993 0.4592 MADQNHNTTQQLPKVLYYGPSGFSSFLKPHPSHNFHILNPSPLSLHQFLATHPHHLSSVAALYSIGCYPVNADVLQLLPSLRLVVTASAGTDHIDLSECRLRGIQVAGAGNLFSEDVADMAVALLIDVIRRISAADRYLRRRLHPVSLDFPLASSKLTGRKVGIVGLGKIGLEVAHRLEAFGCIISYNSRNKKPFVSYPFYSSVVELATESNVLILCCELNNQTRHIINREVMLALGKEGVIVNVGRGALIDEKQLVKCLMKGEVGGAGLDVFENEPHVPKEFFSLDNVVLSPHAAVVTSESYKAICQLVERNLEAFFSNKPLITPVIID* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01353 330 PANTHER 2-HYDROXYACID DEHYDROGENASE-RELATED 30 323 - -
Rops4g01353 330 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 59 327 IPR006139 GO:0016616|GO:0051287
Rops4g01353 330 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 114 296 IPR036291 -
Rops4g01353 330 Gene3D - 114 299 - -
Rops4g01353 330 FunFam Putative 2-hydroxyacid dehydrogenase 114 299 - -
Rops4g01353 330 CDD HPPR 13 319 - -
Rops4g01353 330 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 122 296 IPR006140 GO:0051287
Rops4g01353 330 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 53 142 - -
Rops4g01353 330 Gene3D - 54 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01353 Rops-Chr4 35205590 35207383 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01353 K15919 - gmx:100777313 471.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g01353 4 35205590 35207383 Rops4g01353 4 35205590 35207383 ECH