Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01351 ATGAACGGCGGTGGACGTGACTTGCCACCGCCGTCGAACGGCGGCGAGTTCCTCCTCTCTCTCATCCAGAAATCCCACCATCACCCCCAGACTCCCACACAACCAAGCCCGCCGCCGCCGTCGCAACAATCTCCGGTCATCGATCCGGCCGTCGCCGTAGTGGGTCCCATGATCCCCGTTGACCCCTCACCGTGGCAAATCAACGGTCATGATCATCCCCAGCCACATCATCATCATCATCATCATGTTCCTCTGTGGTCCCACACTCTCCCTTCTTCCCCTTACCCGCCAAACTTATTCGGGTTGACCCAAAACCCGTTTTTGGTACCCGGAAACCACTACCCCACAACCCCAATTCACTTAAGCACCAACACTGTTTCCCTCAGCGACGATCTGCGAAGATTAGGGTTTCCAATTGAAGGGAACGACTCAAACGACGTCGTTCAGCAGCAGGAACTGAAGTTCCAGTTCGGGTCTTTACCTGAAGTTTCATCCAATGGGGATTCCTTACCCAATTTGAAGTTCAATAGAAGCTATAACGGTTTTGACAGGAACTTGCAATTGAACCCCAAATCAAACCCTAATTCAAATTCAGTTGGGAATGTGGTTCTACATGGTACTCATGATGTTGTTGACCAAGAAAGAAGAGGGCTTGGAAGTTTTAGGACTATTGGGTCATCCCCTGATACAAGTAGGGTTCCACCAGGGTTTGGAAACATGACTAGGGGAAGGGGTCATTGGGGTTCTGGCAATGGAAGAAAGGGTTCAGAGGTTAGTGATGATAGGGTTGGAATGGTTGGTTCTGGTGAATTGGGTGCTAGGAATGAGAATTTGTACAATAGGAAAGAAAGTTTGAGAATGGGGTCTGGTGAAAGAAGCAACATTAGAGGCAATGTGGGCCGTGAAATGGGGCTTCCTGCTCAGCTTGATAACCCCGGGCCACCCTCCGGGAGTAACCTCCATTCGGGCTTGGATTCTGGTATTGAAGTGTCTAGGTCCAATTTCAACGCTGGCATTGTTGAAGATGGTGTTAGAGATAAGCGTAAGGGAGTTGCTGAATCTGGCAGAGGTGGTGCTGATGTTGATGTCCTCAGGGAGCAGTTAACAGATTCCTTGTTGCTTGAGGATGAGTCTGATGAAAAAAATAACTCAAGGCAACGGCGCAGCTCTCGGGAAAAGGATGCCAGATCATCAGACTCCAGAGGACAGCATCTGCTAAGCCAGCGGGCAAGAATGTACAAGAGACAGATGACGCGTCGAAGAGACATAGATAGTTTTAATGTTCCTTTCCTTGCAATATATGAGTCTCTAATACCTCCCGAAGAAGAAAAGCTGAAGCAAAAGCAATTATTAGCGTTATTGGAGAAATTAGTTAACAAGGAGTGGCCAACAGCTCGTCTTTATCTCTACGGATCATGTGCTAATTCATTTGGTGTTTCTAAAAGTGACATTGATGTTTGCCTTGCTATTGAGGTAGCAGACATGGACAAATCTAAGATTATAATGAAATTGGCAGATATTTTGCAATCAGATAACCTGCAGAATGTACAGGCATTGACACGAGCAAGGGTTCCTATAGTAAAGCTCATGGATCCAGTTACAGGAATCTCTTGTGACATATGCATCAACAATCTCCTGGCTGTTGTAAATACAAAGCTTCTTCGGGATTATGCACACATAGATGCGAGGTTACGGCAGCTGGCTTTTATTATTAAACATTGGGCAAAGTCTAGAGGAGTCAATGAAACTTACCATGGGACCTTATCTAGCTATGCGTATGTTTTGATGTGCATTCACTTTTTACAACAGCGAAGACCTGCTATCCTTCCATGCTTACAGGAGATGGAGTCAACCTACTCTGTGACTGTGGACGATATCAATTGTGCTTACTTTGACCAAGTTGAAAATCTTCGTGCTTTTGGTCGTCATAACAAGGAAACTATTGCTCATCTTGTGTGGGGATTTTTCTATTATTGGGCATATTGTCATGATTATGCAAATTCTGTTATATCAGTGCGTACAGGAAGCATAATCAGCAAGCGAGAGAAGGATTGGACAAGAAGGATTGGCAATGATCGCCATTTGATATGTATTGAGGACCCTTTTGAAGTATCTCATGATCTGGGTCGAGTGGTAGATAAACACAGCATCAAAGTTCTCAGAGAAGAGTTTGAACGGGCTGCTGATATCATGCAGTATGATCCAAATCCATGTATTAAACTTTTTGAGCCCTATGTGCCTAGTTGA 2247 0.4544 MNGGGRDLPPPSNGGEFLLSLIQKSHHHPQTPTQPSPPPPSQQSPVIDPAVAVVGPMIPVDPSPWQINGHDHPQPHHHHHHHVPLWSHTLPSSPYPPNLFGLTQNPFLVPGNHYPTTPIHLSTNTVSLSDDLRRLGFPIEGNDSNDVVQQQELKFQFGSLPEVSSNGDSLPNLKFNRSYNGFDRNLQLNPKSNPNSNSVGNVVLHGTHDVVDQERRGLGSFRTIGSSPDTSRVPPGFGNMTRGRGHWGSGNGRKGSEVSDDRVGMVGSGELGARNENLYNRKESLRMGSGERSNIRGNVGREMGLPAQLDNPGPPSGSNLHSGLDSGIEVSRSNFNAGIVEDGVRDKRKGVAESGRGGADVDVLREQLTDSLLLEDESDEKNNSRQRRSSREKDARSSDSRGQHLLSQRARMYKRQMTRRRDIDSFNVPFLAIYESLIPPEEEKLKQKQLLALLEKLVNKEWPTARLYLYGSCANSFGVSKSDIDVCLAIEVADMDKSKIIMKLADILQSDNLQNVQALTRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAHIDARLRQLAFIIKHWAKSRGVNETYHGTLSSYAYVLMCIHFLQQRRPAILPCLQEMESTYSVTVDDINCAYFDQVENLRAFGRHNKETIAHLVWGFFYYWAYCHDYANSVISVRTGSIISKREKDWTRRIGNDRHLICIEDPFEVSHDLGRVVDKHSIKVLREEFERAADIMQYDPNPCIKLFEPYVPS* 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01351 748 Pfam TUTase nucleotidyltransferase domain 442 540 IPR045100 GO:0016779
Rops4g01351 748 MobiDBLite consensus disorder prediction 1 47 - -
Rops4g01351 748 FunFam Terminal uridylyltransferase cid1 447 560 - -
Rops4g01351 748 Gene3D - 561 729 - -
Rops4g01351 748 PANTHER POLY A POLYMERASE CID PAP -RELATED 377 734 - -
Rops4g01351 748 MobiDBLite consensus disorder prediction 372 406 - -
Rops4g01351 748 CDD NT_PAP_TUTase 455 558 - -
Rops4g01351 748 MobiDBLite consensus disorder prediction 312 326 - -
Rops4g01351 748 MobiDBLite consensus disorder prediction 282 326 - -
Rops4g01351 748 SUPERFAMILY PAP/OAS1 substrate-binding domain 563 732 - -
Rops4g01351 748 MobiDBLite consensus disorder prediction 372 400 - -
Rops4g01351 748 Pfam Cid1 family poly A polymerase 648 706 IPR002058 -
Rops4g01351 748 MobiDBLite consensus disorder prediction 31 45 - -
Rops4g01351 748 SUPERFAMILY Nucleotidyltransferase 430 559 IPR043519 -
Rops4g01351 748 FunFam Terminal uridylyltransferase cid1 561 729 - -
Rops4g01351 748 MobiDBLite consensus disorder prediction 220 269 - -
Rops4g01351 748 Gene3D Beta Polymerase, domain 2 447 560 IPR043519 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01351 - - gmx:100812787 944.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g01351 4 35197205 35203580 Rops4g01351 4 35197205 35203580 ECH