Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01346 ATGAGTAAAACTCTCTGGGTGACGATGGCCTGCTCAGAACCTGTAAGTGCTGAAGGAGAGACTATGCCAGTGGATGCTGCCCACAGGAAGCCTAGAATTCTACTTGCTGCTAGTGGGAGTGTTGCTGCTGTCAAATTTGCAAATCTTTGTCATTGCTTCTCTGAATGGGCTGAAGTAAGAGCAGTTGCCACAAGTGCATCTTTGCATTTTATTGACAGGACATCAATTCCTAAGGATGTAGTTTTGTATACGGATGAGGATGAATGGTCTAGTTGGAAGAAATTGGGTGATCCCGTGCTTCACATTGAGCTTCGCAAATGGGCTGATATCATCGTCATTGCTCCATTATCAGCAAACACTCTTGGCAAGATTACTGCAGGGTTGTGTGACAATCTACTGACATGTATTGTGCGAGCCTGGGACTACAGCAAGCCATTCTTTGTTGCACCAGCCATGAACACTTTTATGTGGAACAATACTTTCACAGAGCGACATCTTATCTCGATTGATGAGCTTGGCATTTCTCTCATTCCACCTGTTACAAAGAGGTTAGCTTGTGGGGATTATGGCAATGGTGCAATGGCTGAACCTTCTACCATTTACTCAACTGTAAGGCTCTTATATGAGTCAAGGGCTCAGCAAGGTAATGGTGATATTTAA 660 0.4409 MSKTLWVTMACSEPVSAEGETMPVDAAHRKPRILLAASGSVAAVKFANLCHCFSEWAEVRAVATSASLHFIDRTSIPKDVVLYTDEDEWSSWKKLGDPVLHIELRKWADIIVIAPLSANTLGKITAGLCDNLLTCIVRAWDYSKPFFVAPAMNTFMWNNTFTERHLISIDELGISLIPPVTKRLACGDYGNGAMAEPSTIYSTVRLLYESRAQQGNGDI* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01346 219 Gene3D - 30 218 IPR036551 GO:0003824
Rops4g01346 219 FunFam Phosphopantothenoylcysteine decarboxylase 25 217 - -
Rops4g01346 219 SUPERFAMILY Homo-oligomeric flavin-containing Cys decarboxylases, HFCD 30 206 IPR036551 GO:0003824
Rops4g01346 219 PANTHER HOMO-OLIGOMERIC FLAVIN CONTAINING CYS DECARBOXYLASE FAMILY 23 212 - -
Rops4g01346 219 Pfam Flavoprotein 32 205 IPR003382 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01346 Rops-Chr4 35123612 35125803 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01346 K01598 - gmx:100499989 396.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02175 8 50336572 50340046 Rops4g01346 4 35123612 35125803 PCT