Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01267 ATGCATAGATCTGGAGCTACGATGGCTTGGAACGTGTTCAAGTTCTGCACAGCTCTACGAGGATTGGGCTCGATCATGATCCTATTGGTCCTTGGGGTTGTTGGTGTTACTTATTATGCTGTTGTTGTAACTAATTATGTCCCTACTTTGTATGCTGGAGGGTTTGATTTTCTTATTGCGATGGTGGTGTTGATCTTGTTTCATGGTTTGTTGGTTATGTTATTGTGGAGTTACTTTTCTGTCGTTTTTACCGATCCGGGGAGTGTACCTCCAAACTGGAGGCCTACAATTGATGAGGAAAGAGGAGAGGCTGACCCGTTAGTGGGGTCAGAATTCGGTAACGTGCAGTTGGATACTTCTAATCAATGCGTCCGGTATTGTCGGAAGTGCAACCAGCTCAAGCCTCCTCGATGCCATCATTGTTCAGTTTGTGGACGTTGTGTGTTGAAGATGGACCACCATTGCGTGTGGGTAGTTAACTGTGTTGGGGCTCTAAATTACAAGTATTTCCTTCTTTTCTTGTTCTACACTTTCCTTGAGACGACTCTTGTGACTGCATCCTTACTGCCTCATTTCATAGCATTCTTTAGTGATGGAGAAATTCCTGGAACACCTGGCTCTCTTGCTACAACCTTTCTTGCTTTTGTTTTGAACCTGGCTTTTGCATTGAGTGTCTTGGGATTTCTTATCATGCACATATCATTGGTGGCTGCTAATACAACCACTATCGAGGCATATGAGAAGAAAACTACTCCAAAATGGCGTTATGACCTTGGTCGTCGAAAAAATTTTGAACAGGTTTTTGGGATGGACAAGAAGTACTGGTTCATCCCTGGTTACTCAGAAGAAGATATACGAAGGATGCCAGCACTGCAAGGCCTTGAATATCCATCAAAACCAGACTTCGATTCCCAATAG 918 0.4357 MHRSGATMAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVVTNYVPTLYAGGFDFLIAMVVLILFHGLLVMLLWSYFSVVFTDPGSVPPNWRPTIDEERGEADPLVGSEFGNVQLDTSNQCVRYCRKCNQLKPPRCHHCSVCGRCVLKMDHHCVWVVNCVGALNYKYFLLFLFYTFLETTLVTASLLPHFIAFFSDGEIPGTPGSLATTFLAFVLNLAFALSVLGFLIMHISLVAANTTTIEAYEKKTTPKWRYDLGRRKNFEQVFGMDKKYWFIPGYSEEDIRRMPALQGLEYPSKPDFDSQ* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01267 305 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 26 281 - -
Rops4g01267 305 ProSiteProfiles DHHC domain profile. 125 175 - -
Rops4g01267 305 Pfam DHHC palmitoyltransferase 125 248 IPR001594 GO:0016409
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01267 Rops-Chr4 33583624 33589030 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01267 8 305 Lipid Metabolism Gene Families AT4G22750 67.000 6.93e-131 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01267 K20028 - gmx:100819811 528.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g01267 4 33583624 33589030 Rops4g01267 4 33583624 33589030 ECH