Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01255 ATGGCCCAAGTGACCAGAATCCAGAATCTAGCTCAAAGCACTCCGATTTTTCACCATGCTTCAAATTCCCACAAACCCAAGTCAGCAAACTCAATTTCATTGAGGTCCCACCTTTGGGGCTCCTCAAAATCTTGGAGCTTGAAGCATAAAAGTGGAAGCTTTATGGAAAATTGTGAGGTGGGTAATGGAAATTTCGGTGTGTTTAAGGTTTCTGCCTCTGTTGCCGCCGCAGAGAAGCCGTCAACTGCGCCGGAGATCGTGTTGGATCCCATCAGAGAAATCTCTGGTACCATTACATTGCCTGGTTCAAAGTCTCTATCCAATCGAATTCTGCTTCTTGCTGCTCTCTCTGAGGGAACAACTGTTGTAGACAACTTGTTGAATAGTGAGGATGTTCATTACATGCTTGGTGCATTAAGGACCCTTGGCTTGCGTGTGGAAGATGACAAAACAACCAAACAAGCAATTGTGGAAGGCTCTGGGGGATTATTTCCCACTGGTAGAGAATCTAAAGATGAAGTTACTTTATTCCTTGGAAATGCTGGTACTGCAATGCGTCCTTTGACTGCAGCCGTGACTGCTGCAGGTGGAAATGCAAGCTATGTACTTGATGGGGTGCCCCGAATGAGAGAGAGGCCAATTGGGGATTTGGTAGATGGTCTTAAGCAGCTTGGTGCTGGCGTTGATTGCTTTCTTGGCACCAACTGTCCACCTGTTCGTGTAATTGGGAAAGGAGGACTTCCAGGGGGAAAGGTGAAACTGTCTGGATCAGTTAGTAGTCAGTACCTGACTGCTTTGCTTATGGCAGCTCCTTTGGCTCTTGGTGATGTGGAGATTGAGATTATTGATAAACTGATTTCTGTTCCATATGTTGAAATGACTTTGAAGTTGATGGAGCGCTTTGGAGTCTCTGTGGAACACAGTGGTAATTGGGATAGGTTTTTGATCCATGGAGGTCAAAAGTACAAGTCTCCTGGCAATGCTTTTGTTGAAGGTGATGCTTCAAGTGCCAGTTACTTCCTAGCTGGTGCAGCAGTTACTGGTGGGACTATCACTGTTAAAGGTTGCGGGACAAGCAGTTTACAGGGAGATGTAAAATTTGCTGAAGTTCTTGAAAAGATGGGAGCTAAAGTTACATGGATGGAAAACAGTGTCACTGTTACTGGACCACCACGAGATTCTTCTGGTAGAAAAGTCTTTCAAGGCATTGATGTCAATATGAACAAGATGCCAGATGTTGCCATGACACTTGCTGTTGTTGCACTATTTGCTAATGGTCCCACTACTATAAGAGATGTGGCAAGTTGGAGAGTTAAAGAGACAGAGAGAATGATAGCAATCTGCACAGAACTCAGAAAGCTAGGAGCAACAGTTGAAGAAGGTCCAGATTACTGTGTGATAACTCCACCTGAGAAATTGAACATCACATCTATAGACACTTATGATGACCATAGAATGGCCATGGCATTTTCTCTTGCTGCTTGTGGAGATGTTCCAGTAACCATCAAGGATCCTGGTTGCACCAGGAAAACATTCCCTGATTATTTTGAAGTCCTTGAGAGGTTCACCAAGCATTAA 1578 0.4442 MAQVTRIQNLAQSTPIFHHASNSHKPKSANSISLRSHLWGSSKSWSLKHKSGSFMENCEVGNGNFGVFKVSASVAAAEKPSTAPEIVLDPIREISGTITLPGSKSLSNRILLLAALSEGTTVVDNLLNSEDVHYMLGALRTLGLRVEDDKTTKQAIVEGSGGLFPTGRESKDEVTLFLGNAGTAMRPLTAAVTAAGGNASYVLDGVPRMRERPIGDLVDGLKQLGAGVDCFLGTNCPPVRVIGKGGLPGGKVKLSGSVSSQYLTALLMAAPLALGDVEIEIIDKLISVPYVEMTLKLMERFGVSVEHSGNWDRFLIHGGQKYKSPGNAFVEGDASSASYFLAGAAVTGGTITVKGCGTSSLQGDVKFAEVLEKMGAKVTWMENSVTVTGPPRDSSGRKVFQGIDVNMNKMPDVAMTLAVVALFANGPTTIRDVASWRVKETERMIAICTELRKLGATVEEGPDYCVITPPEKLNITSIDTYDDHRMAMAFSLAACGDVPVTIKDPGCTRKTFPDYFEVLERFTKH* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01255 525 CDD EPSP_synthase 94 522 IPR006264 GO:0003866|GO:0009073
Rops4g01255 525 Pfam EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 89 519 IPR001986 GO:0016765
Rops4g01255 525 ProSitePatterns EPSP synthase signature 2. 437 455 IPR023193 -
Rops4g01255 525 ProSitePatterns EPSP synthase signature 1. 176 190 IPR023193 -
Rops4g01255 525 FunFam 3-phosphoshikimate 1-carboxyvinyltransferase 102 314 - -
Rops4g01255 525 Gene3D Enolpyruvate transferase domain 320 524 IPR036968 GO:0016765
Rops4g01255 525 FunFam 3-phosphoshikimate 1-carboxyvinyltransferase 319 523 - -
Rops4g01255 525 Gene3D Enolpyruvate transferase domain 102 314 IPR036968 GO:0016765
Rops4g01255 525 SUPERFAMILY EPT/RTPC-like 88 521 IPR013792 GO:0003824
Rops4g01255 525 Hamap 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 92 525 IPR006264 GO:0003866|GO:0009073
Rops4g01255 525 PANTHER AROM/DEHYDROQUINATE SYNTHASE 75 521 - -
Rops4g01255 525 NCBIfam 3-phosphoshikimate 1-carboxyvinyltransferase 96 524 IPR006264 GO:0003866|GO:0009073
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01255 K00800 - gmx:100789268 914.835
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g01255 4 33440187 33447019 Rops4g01255 4 33440187 33447019 ECH