Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01252 ATGGAGGTGGGTTTGCTTCCAATCTCTGCATCAAAGAGAGGAAAACTCTTAGCAGCTGGTTACACCACACTCGATTCCATTGCTCGCACCTCCCCCACTAACCTTGCTCGAGCTATAGAAGTTTCTGAGAGTGAAGCTTCAGAAATTCTGAAATATGCAACCAAAACTAGTGCTTTGGATAGATCAAATGGGAGTAACACAAATGTTCTTGATGGTGGTCAGACTGCTTGGGATATGCTCAATGAGGAAAAGTTTTCTTCTCACATCACCACATCTTGTGTGGATCTGGATAACATCCTTGGTGGAGGGATTAATTGCAAAGAAGTCACTGAAATAGGTGGAGTTCCAGGCATTGGTAAAACACAAATTGGGATTCAACTTGCAGTAAATGTTCAGATTCCACTAGAATATGGTGGCCTAGGTGGGAAGGCAATATACATTGACACAGAAGGAAGCTTTATGGTTGAACGTGTTCTACAAATAGCTGAAGCATGCATAGAAGACATGTCAGAATATAGCCACCACTTTCACAGGGATATTCAAGCTCGTGAAGTTAAAATGCACCCTAATAGTATCTTGGAAAATATATTCTATTTTCGTGTTTGCAGCTATACGGAACAAATTGCTTTAGTAAATTACTTAGACAAATTCATCACAGAGCATAAAGATGTAAAGATCATCATTATTGACAGTGTTACTTTCCACTTCCGACAAGACTTCGAAGATATGGCTCTCAGGACTCGATTACTTGGTGAAATGGCATTAAAGTTGATGAAGCTTGCAAGAAAGTTCTGTTTGGCTGTTGTTATGTTGAATCAAGTAACAACCAAGCATATTGAAGGTTCATTTCAATTGACCCTTGCACTGGGTGATAGCTGGTCACATTCATGCACAAACCGGATCATCTTACATTGGAATGGCAATGAACGACATGCATATATTGACAAGTCCCCTTCTCTTAAATCAGCATCAGCACCATATTCTGTGACCTCTAGGGGGATCCGAAATTCTACTTCAAACAGTAAACGAATCAAGATGATGTGA 1044 0.4013 MEVGLLPISASKRGKLLAAGYTTLDSIARTSPTNLARAIEVSESEASEILKYATKTSALDRSNGSNTNVLDGGQTAWDMLNEEKFSSHITTSCVDLDNILGGGINCKEVTEIGGVPGIGKTQIGIQLAVNVQIPLEYGGLGGKAIYIDTEGSFMVERVLQIAEACIEDMSEYSHHFHRDIQAREVKMHPNSILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKIIIIDSVTFHFRQDFEDMALRTRLLGEMALKLMKLARKFCLAVVMLNQVTTKHIEGSFQLTLALGDSWSHSCTNRIILHWNGNERHAYIDKSPSLKSASAPYSVTSRGIRNSTSNSKRIKMM* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01252 347 PANTHER DNA REPAIR PROTEIN RAD51 HOMOLOG 3 RAD51C 1 347 - -
Rops4g01252 347 CDD Rad51C 107 318 - -
Rops4g01252 347 SUPERFAMILY Rad51 N-terminal domain-like 5 56 IPR010995 GO:0000166
Rops4g01252 347 PIRSF Rad51 1 340 IPR016467 -
Rops4g01252 347 Gene3D - 14 56 - -
Rops4g01252 347 FunFam DNA repair protein RAD51 72 338 - -
Rops4g01252 347 ProSiteProfiles RecA family profile 1. 85 274 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Rops4g01252 347 Gene3D - 69 338 IPR027417 -
Rops4g01252 347 Pfam Rad51 74 336 IPR013632 -
Rops4g01252 347 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 88 335 IPR027417 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01252 K10870 - gmx:100527406 549.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g01252 4 33411807 33416171 Rops4g01252 4 33411807 33416171 ECH