Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01244 ATGAAAAATATTGTATTTATAGGGGGACACAATCTACTAATTCTTGCACGAGATCTTGGGCAATACATACAACTTGGAACTACAATAGATGATGCTATTGGTGAGGCATATGACAAGACAGCAAAATGGCTTGGACTTGATATGAGGAGAAGTGGTGGTCCTGCAATAGAGGAGCTTGCTAGGGAGGGTAATGCTGAATCAGTCAGTTTTTCTATTCCAATGAAGCAGCACAAAGATTGCAACTTTTCCTATGCAGGTCTAAAAACCCAAGTAAGGCTGGCAATTGAGTCCAAGAAGATTGATCCCAAAATTCCTATTTCTTCTGCAAGTTATGAAGACCGATTGTCTCGGGCTGATATTGCTGCTTCTTTTCAGCGAATTGCAGTGTTACATCTTGAGGAAAGATGTGAACGAGCAATAGAATGGGCATTGAAGATGGAGCCTTCTATAAGATACCTGGTTGTCTCTGGTGGTGTTGCATCAAATCAATATGTTCGGGCTCGGCTTGATATGGTTGTGAAGAAGAATGGTCTGCAACTTGTATGCCCTCCTCCCCGGCTTTGTACTGACAATGGTGTAATGGTTGCTTGGACTGGTATTGAGCACTTTCGCATGGGAAGATATGACCCCCCTCCTCCTGCAGAAGAACCAGAAGACTTTGTGTATGATTTACGCCCGAGGTGGCCGCTAGGGGAAGAATATGCTGAAGGAAAAAGTCAAGCACGCTCCTTAAGAACAGCACGTGTGCATCCTTCTCTTACGTCTCAAATACAAGCATCATTGCAACAGTGA 792 0.4369 MKNIVFIGGHNLLILARDLGQYIQLGTTIDDAIGEAYDKTAKWLGLDMRRSGGPAIEELAREGNAESVSFSIPMKQHKDCNFSYAGLKTQVRLAIESKKIDPKIPISSASYEDRLSRADIAASFQRIAVLHLEERCERAIEWALKMEPSIRYLVVSGGVASNQYVRARLDMVVKKNGLQLVCPPPRLCTDNGVMVAWTGIEHFRMGRYDPPPPAEEPEDFVYDLRPRWPLGEEYAEGKSQARSLRTARVHPSLTSQIQASLQQ* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01244 263 PRINTS O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 2 14 IPR017861 -
Rops4g01244 263 PRINTS O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 153 162 IPR017861 -
Rops4g01244 263 PRINTS O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 25 46 IPR017861 -
Rops4g01244 263 MobiDBLite consensus disorder prediction 245 263 - -
Rops4g01244 263 Gene3D - 3 182 - -
Rops4g01244 263 FunFam Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial 2 183 - -
Rops4g01244 263 SUPERFAMILY Actin-like ATPase domain 5 199 IPR043129 -
Rops4g01244 263 MobiDBLite consensus disorder prediction 235 263 - -
Rops4g01244 263 Pfam tRNA N6-adenosine threonylcarbamoyltransferase 8 197 IPR000905 -
Rops4g01244 263 PANTHER TRNA N6-ADENOSINE THREONYLCARBAMOYLTRANSFERASE 5 236 IPR000905 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01244 Rops-Chr4 33241932 33245667 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01244 K01409 - gmx:100784367 476.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g01244 4 33241932 33245667 Rops4g01244 4 33241932 33245667 ECH