Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01234 ATGCGATCTCTTCCTCTCAGAAACGCACCTTCTCCATTCTTCCATTTTCTTCCTTCATCTTCTCTTCAACCCACACTTTCATTCATCCACCCTTTTACCAAATCACAAGCCATGATGGGTTCCTTTTTTTCTTCTTCTTCTTCTCCTTCTCCTTCCACATCCTACAACACACAACCACCACAACAACATGAAAAACAACAAAACCTTGACGAACACAAACTCTCCCACGTGCTCAAATACCACAACCAAACCAAGCACAATTTCAACAGCTACGCTAGAGGACCCCACGGTCTCGATTGGGCCAACCAGCCCAACCCATTTCGAAGATACCTCAATTCTCCTCTTCTCTCTCTCCTCCACTTCCCACAAACTGAAGAACAAGCACCATCCCTTTACTCTTCTCTCTTCAATTCTCTTCCCTCTCCAAAACCCATTTCCAAATCCACCATTTCCCAATTCCTCTATGATTCCCTTGCCCTTTCTGCATGGAAAACCGCTGGCTCTTCCACTTGGTCCCTCAGGGTAAACCCCAGTAGTGGAAATTTACACCCCACTGAGGCTTATATCATTGCACCTGCTATTGAATCACTCTCTGATTCCCCTTTTGTTGCTCATTATGCTCCAAAGGAACATTCTTTGGAGTTCAGAGCAAAAATCCCATCTGGGTTTTTCTCCAAGTTTTTCCCTCCAAATTCATTTCTTGTGGGATTTTCCTCCATTTTCTGGCGTGAGGCTTGGAAGTATGGTGAACGTGCTTTCAGGTATTGTAACCATGATGTTGGTCATGCCATTGGTGCTGTTGCAATGGCTGCTGCTGGTCTTGGTTGGGATGTGAAGCTTTTGGACTCTTTGGGGTGTGATGATTTGAAGTCTCTTATGGGGCTTCATGTTTTTCCAGAATTTGAAATTCCATCACGTGCTGTTAAAGGGAAGATTCCAGAGATTGAGTTTGAGCATCCTGATTGTGTCATGTTGGTTTTTCCAAGTGGGGTTAGTGGTTTTGATGTGAATTATAAGGAGTTAAGTTCTACTATATTTGAGTTTAACAAATTGGAATGGAAAGGGAAGCCTAATTCCCTTAGCAAAGAGCATGTTTGTTGGGATATTATTTATAGAACTGCTGAGGTTGTGAAAAAGTCTTTGACTTTAGGGAATAAGTTCTTGGTTGATCCATTTCAAAGGAGTGGACTTTATAGTGAAACTTCTTACAAAGGTTTTACAATGAGGCACGTTGTAAGGAAGCGTAGAAGTGCTGTTGATATGGATGGAGTTACAAATATTGAGAGGGATACTTTTTATCAGATTCTATCACATTGTCTTCCTTCAGGTTGCCAAATTGGAGGGAAGCAAAGGAAACAACTTGCATTGCCATTTAGAGCACTTCCATGGGATGCTGAGGTGCATTGTGCTTTGTTTGTTCAGAGAGTGGTGGGGTTACCTCAAGGCTTGTATTTCCTTGTGAGGAATGAAAATCATTTCGATGAGTTGAAGAAAGCTACGCTCCCTGACTTTCACTGGACCAAACCAGAAGGGTGCCCTGATGATCTTCCTTTGTATGAACTCCTTAGATCTGATTGTCGGCGGCTTGCCAAGCAGCTTTCATGCCACCAGGACATTGCAAGTGATGGTTGCTTCAGCCTTGGTATGTTGGCTCGTATGGAGCCTACTTTGCGTGAGAGGAATGTCTGGATGTATCCACGTTTATTTTGGGAGACTGGAGTCCTTGGACAGGTTCTGTACCTGGAAGCACATGCTATTGAAATATCAGCAACTGGAATTGGTTGTTTCTTTGATGACCCTGTGCATCAGTTGCTTGGGTTAAAAGGGTCAGCCTTCCAGAGCCTCTATCATTTTACTGTTGGAGGTCCTGTCTTAGACAAGCGTATAATGAGTTTACCAGCGTATCCAGGCCCTAATGTTGATGCTTGA 1929 0.4339 MRSLPLRNAPSPFFHFLPSSSLQPTLSFIHPFTKSQAMMGSFFSSSSSPSPSTSYNTQPPQQHEKQQNLDEHKLSHVLKYHNQTKHNFNSYARGPHGLDWANQPNPFRRYLNSPLLSLLHFPQTEEQAPSLYSSLFNSLPSPKPISKSTISQFLYDSLALSAWKTAGSSTWSLRVNPSSGNLHPTEAYIIAPAIESLSDSPFVAHYAPKEHSLEFRAKIPSGFFSKFFPPNSFLVGFSSIFWREAWKYGERAFRYCNHDVGHAIGAVAMAAAGLGWDVKLLDSLGCDDLKSLMGLHVFPEFEIPSRAVKGKIPEIEFEHPDCVMLVFPSGVSGFDVNYKELSSTIFEFNKLEWKGKPNSLSKEHVCWDIIYRTAEVVKKSLTLGNKFLVDPFQRSGLYSETSYKGFTMRHVVRKRRSAVDMDGVTNIERDTFYQILSHCLPSGCQIGGKQRKQLALPFRALPWDAEVHCALFVQRVVGLPQGLYFLVRNENHFDELKKATLPDFHWTKPEGCPDDLPLYELLRSDCRRLAKQLSCHQDIASDGCFSLGMLARMEPTLRERNVWMYPRLFWETGVLGQVLYLEAHAIEISATGIGCFFDDPVHQLLGLKGSAFQSLYHFTVGGPVLDKRIMSLPAYPGPNVDA* 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01234 642 CDD McbC_SagB-like_oxidoreductase 409 622 - -
Rops4g01234 642 SUPERFAMILY FMN-dependent nitroreductase-like 486 626 IPR000415 GO:0016491
Rops4g01234 642 SUPERFAMILY FMN-dependent nitroreductase-like 143 295 IPR000415 GO:0016491
Rops4g01234 642 Gene3D NADH Oxidase 97 313 IPR000415 GO:0016491
Rops4g01234 642 MobiDBLite consensus disorder prediction 42 64 - -
Rops4g01234 642 Gene3D NADH Oxidase 389 623 IPR000415 GO:0016491
Rops4g01234 642 MobiDBLite consensus disorder prediction 42 68 - -
Rops4g01234 642 CDD McbC_SagB-like_oxidoreductase 126 305 - -
Rops4g01234 642 PANTHER NITROREDUCTASE FAMILY PROTEIN 43 642 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01234 - - psat:127107540 1043.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g01234 4 33074070 33078312 Rops4g01234 4 33074070 33078312 ECH