Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01230 ATGCTACCAACTGGAGCAAAAGAGACCCAATTACGTGAGAGCAACAGTCAGAAGGTCCACCCTCAACCCATGGAAGAGGCCATGAATCAGAATCCAGAAGCTGTGGAAACTCTAATATCTAAAATTTTTACAAATATTTCTTCTCTGAAGTCAGCTTATATCCAGCTGCAAGCTGCTCATACTCCCTATGATCCTGATAAAATCCACACTGCTGATAAACTTGTTATTAGTGAGCTGAAAAATCTGTCTGAAGTGAAGCATTTCTACAGGGAAAACAACCCAAAACCAGTGTGTGTTTCTCCCCAAGACTCACGTTTAGCTGCAGAGATTCAAGAACAACAGAGCCTCTTGAAAACTTATGAGGTCATGGTGAAAAAATTCCAGTCTGAAATCCAGAATAAAGATTCAGAGATCCATCAATTGCAGCAGCAAATTGAGGAGGCTAACCAGAAGCGAGCAAAACTAGAAAAAAATCTGAAGCTTAGAGGTTTGTCAACCAAAGAATCAGAAGATGAAAATGGATTTTTCCCTGTTGATCTAACTCCAGATCTTTTCATCTCTGCTGTGGAAGCAGCTGCAAAAGCCATTCATGACTTTTCTAAACCTTTGATCAACATGATGAAAGCAGCTGGGTGGGACCTTGATGCTGCTGCCAACTCAATTGAACCTGATGTTGTTTATGCAAAGAGAGCTCATAAGAAATATGCATTCGAGTCTTACATATGCCAAAGAATGTTTGGTGGCTTTGAGCAAGAAAGTTTCTCTGTCAAAACAGACAATATTACAGTCACTAAAGAGAGCTTCTTCCACCAGTTTCTTGCTTTAAGGGAGATGGATCCCTTGGACATGTTAGGGCAAAATCCAGATTCCATTTTTGGAAAATTTTGCAGGAGCAAATACCTAGTGGTACTTCATCCAAAGATGGAAGCATCATTCTTCGGAAATTTAGATCAGCGAAATTATGTGATGGGTGGAGGGCATCCAAGGACTCCTTTTTACCAGGCTTTTCTAAAACTGGCCAAGTCAATTTGGCTTTTACACAGGTTGGCTTATTCTTTTGAACCAAATGTCAAGGTATTTCAGGTTAAAGGAGGGAGTGAGTTCTCTGATGTTTATATGGAAAGCGTGGTCAAGAATCTGATAATGGATGACAATGATGAAAAGCCCAAAGTTGGCTTGATGGTTATGCCTGGATTTTGGATTGGGGGAAGTGTGATTCAGAGTAAAGTTTATCTCTCTGGTATGAAGGTAGCTGAATGA 1260 0.4032 MLPTGAKETQLRESNSQKVHPQPMEEAMNQNPEAVETLISKIFTNISSLKSAYIQLQAAHTPYDPDKIHTADKLVISELKNLSEVKHFYRENNPKPVCVSPQDSRLAAEIQEQQSLLKTYEVMVKKFQSEIQNKDSEIHQLQQQIEEANQKRAKLEKNLKLRGLSTKESEDENGFFPVDLTPDLFISAVEAAAKAIHDFSKPLINMMKAAGWDLDAAANSIEPDVVYAKRAHKKYAFESYICQRMFGGFEQESFSVKTDNITVTKESFFHQFLALREMDPLDMLGQNPDSIFGKFCRSKYLVVLHPKMEASFFGNLDQRNYVMGGGHPRTPFYQAFLKLAKSIWLLHRLAYSFEPNVKVFQVKGGSEFSDVYMESVVKNLIMDDNDEKPKVGLMVMPGFWIGGSVIQSKVYLSGMKVAE* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01230 419 MobiDBLite consensus disorder prediction 1 26 - -
Rops4g01230 419 Pfam Plant protein of unknown function (DUF641) 31 157 IPR006943 -
Rops4g01230 419 Gene3D - 65 161 - -
Rops4g01230 419 MobiDBLite consensus disorder prediction 8 24 - -
Rops4g01230 419 Coils Coil 110 158 - -
Rops4g01230 419 PANTHER PROTEIN GRAVITROPIC IN THE LIGHT 1 12 413 IPR040225 GO:0009639|GO:0009959
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01230 Rops-Chr4 33036380 33037639 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01230 - - gmx:100499972 816.224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g01230 4 33036380 33037639 Rops4g01230 4 33036380 33037639 ECH