Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01224 ATGAAGGAAGAGTCATCATTCACTGTGCCAAGTGTGAGGCACCATAGTCTTTTGCGCCATTGTGGCAACGTTGTTCTTTTCACATTTCTGCAAATCCTAGCCTTCACTTATTTGCAATCAATGGCTGGTGAATCAGATGTTTCCGAAAATACCCTTTCTTGTGCTAACTGTGGCAAACCTGCAAATCTTCAGTGTCCAAAATGCATGGAGTTGAAGCTTCCTCGTGAAGGTTCTGCCTTCTGCACTCAGGAATGTTTCAAGTCTTCATGGAGCATGCACAAATCAGTGCATCTGAAGGCAAAGCTATCTTCATCTGGTACACAGAATTCAGACTCACTTGGTGAAGGTTGGTTATATTGCTTGAAGAAAGGGCAGAGTCGAACTCCAAAGCTTCCTCACTTTGATTGGACTGGGGCGCTGCGGCCATATCCCATATCTAGTAAACAGATTGTCCCAGCTCATATTGATAAACCCGATTGGGCTAATGATGGGATTCCCAAAGTTGAGCCCAATAGTGATCTGCAGCATACTGTTGAGATCAAATCTCCAGATCAAATTGAGAGAATGAAAGAAGTTTGTCAGATTGCAAGGGAGGTGTTGGATGCAGCTGCTCGGATTATTAAGCCTGGTGTGACAACTGATGAAATTGACAGAGTTGTTCATGAGGCAACTATTGCTGCAGGAGGATATCCATCTCCTCTCAATTACCATTTCTTCCCTAAATCTTGCTGCACGTCAGTTAATGAAGTAATCTGCCATGGAATTCCTGATGCAAGGAAGCTTGAGGATGGTGACATTGTAAATGTTGATGTCACTGTGTACTATAAAGGTGTTCATGGTGATCTCAATGAAACATACTTTGTGGGAAATGTTGACGACGAGTCTCGCCAGCTGGTCAAATGCACATATGAATGCCTGGAGAAGGCAATATCCATTGTTAAACCTGGGGTAAGATTCCGTGAAATTGGTGAAGTTGTAAATCGTCATGCTTCAATGTCAGGCTTCTCAGTGGTAAAATCAATTTGTGGTCATGGAATTGGAGAGCTCTTCCATTGTGCACCAAACATTCCTCATTATGCAAGAAATAAAGCAGTTGGTGTGATGAAGGCTGGACAGACCTTTACAATTGAACCGATGATCAATGCAGGTGTCTGGCGTGATCGAATGTGGCCTGATGGATGGACTGCTGTAACAGCAGATGGTAAACGAAGTGCTCAATTTGAGCACACTCTTTTGGTGACAGAGACTGGTGTTGAAGTTTTAACAGGGCGGTTGGAGACATCACCCAATGTTTTTCCTTGGTTAAACTCATAA 1314 0.433 MKEESSFTVPSVRHHSLLRHCGNVVLFTFLQILAFTYLQSMAGESDVSENTLSCANCGKPANLQCPKCMELKLPREGSAFCTQECFKSSWSMHKSVHLKAKLSSSGTQNSDSLGEGWLYCLKKGQSRTPKLPHFDWTGALRPYPISSKQIVPAHIDKPDWANDGIPKVEPNSDLQHTVEIKSPDQIERMKEVCQIAREVLDAAARIIKPGVTTDEIDRVVHEATIAAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDARKLEDGDIVNVDVTVYYKGVHGDLNETYFVGNVDDESRQLVKCTYECLEKAISIVKPGVRFREIGEVVNRHASMSGFSVVKSICGHGIGELFHCAPNIPHYARNKAVGVMKAGQTFTIEPMINAGVWRDRMWPDGWTAVTADGKRSAQFEHTLLVTETGVEVLTGRLETSPNVFPWLNS* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01224 437 PRINTS Methionine aminopeptidase-1 signature 366 378 IPR001714 -
Rops4g01224 437 PRINTS Methionine aminopeptidase-1 signature 243 256 IPR001714 -
Rops4g01224 437 PRINTS Methionine aminopeptidase-1 signature 265 281 IPR001714 -
Rops4g01224 437 PRINTS Methionine aminopeptidase-1 signature 335 347 IPR001714 -
Rops4g01224 437 FunFam Methionine aminopeptidase 134 430 - -
Rops4g01224 437 CDD MetAP1 186 422 IPR002467 GO:0006508|GO:0070006
Rops4g01224 437 Hamap Methionine aminopeptidase [map]. 178 424 IPR002467 GO:0006508|GO:0070006
Rops4g01224 437 Pfam Metallopeptidase family M24 187 415 IPR000994 -
Rops4g01224 437 Gene3D - 37 100 - -
Rops4g01224 437 Gene3D Creatinase/methionine aminopeptidase superfamily 134 434 IPR036005 -
Rops4g01224 437 Pfam zf-MYND-like zinc finger, mRNA-binding 55 98 IPR031615 -
Rops4g01224 437 NCBIfam methionine aminopeptidase, type I 179 423 IPR002467 GO:0006508|GO:0070006
Rops4g01224 437 SUPERFAMILY Creatinase/aminopeptidase 133 423 IPR036005 -
Rops4g01224 437 PANTHER METHIONINE AMINOPEPTIDASE 52 424 - -
Rops4g01224 437 SUPERFAMILY HIT/MYND zinc finger-like 52 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01224 Rops-Chr4 32891665 32898692 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01224 K01265 - gmx:100813779 776.163