Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01200 ATGAGGGATCCGAATCTGGAGTTGCAGGAATCGGGTTGGGAGGAACTGCGAAAGGAAGCGCGTAAGATCGAGGGCGATCTCGACGTCAAGCTTTCTTCTTACGCAAAGCTCGGTGCTAGGTTCACCCAAGGAGGTTATGTGGATGGTGGCTCACCACCTCTTGGGTCCAGTAGGTCTTGGAAGTCCATGGAAATGGAAATCCAGTCCTTGCTCGAGAAACTGTTGGACATAAATGATTCAATGAGTAGATGTGCTGCATCTGCTGGACCTGCCACTTCTGTAACTCAAAAGTTGGCTAGGCATAGAGATATTCTTCATGAGTTTACTCAGGAATTTAGGCGTACCAAGGGGAACATAAACTCAATGAGGGAACATGCAGAGCTTTTGAGTTCTGTCAGGGATGATATTACCGACTTTAAGACATCGGGTAGTATGTCACCAAGGATGCAGTTACTACGTGAAAGAGCTGCCATCCATGGAAGTACATCTCATATTGATGATGTGATTAGTCAAGCTCAAGCAACAAGAGCTGTCTTGGGTTCTCAGAGGGCTTTATTTGGTGATGTTCAAGGAAAAGTGAAGCTTCTTGGCGACAAGTTCCCCATTATTCGTAGCCTGCTTGGCTCGATAAGAAGGCGACGTTCAAGGGATACCCTTATTCTGTCGGCAGTAATTGCTGCTTGTACATTGTTTCTCATCATTTATTGGCTCTCCAAGTAA 720 0.4597 MRDPNLELQESGWEELRKEARKIEGDLDVKLSSYAKLGARFTQGGYVDGGSPPLGSSRSWKSMEMEIQSLLEKLLDINDSMSRCAASAGPATSVTQKLARHRDILHEFTQEFRRTKGNINSMREHAELLSSVRDDITDFKTSGSMSPRMQLLRERAAIHGSTSHIDDVISQAQATRAVLGSQRALFGDVQGKVKLLGDKFPIIRSLLGSIRRRRSRDTLILSAVIAACTLFLIIYWLSK* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01200 239 PIRSF Golgi_SNARE 7 238 IPR023601 GO:0000139|GO:0005801|GO:0006888|GO:0016020
Rops4g01200 239 PANTHER GOS-28 SNARE- RELATED 9 238 IPR023601 GO:0000139|GO:0005801|GO:0006888|GO:0016020
Rops4g01200 239 Pfam Snare region anchored in the vesicle membrane C-terminus 150 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01200 Rops-Chr4 32528247 32536413 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01200 K08495 - gmx:100781813 427.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g01200 4 32528247 32536413 Rops4g01200 4 32528247 32536413 ECH