Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01175 ATGCCGAAATGCGACACATCTAATTCCGAATCCGAGGATGCTTGTTCAAACTCAGAGTCAGAGGAGACAGAAACCGTGGCCAATGGGAAACCCCAACAACAGGGCATTTCGGAGTACGAGGAACAGAGACTTCGTAGAATTGCAGAGAACAAAGCGAGGTTGGAGGCTCTTGGGTTGCCCCAAATTGCTTCCTCCTTGAAGTCACTGCCTCGTAACAAGAAGAAGAAGGACAAAGAGAAGAAGAAGGTTGAAGATGAAGACGAAGAGTATAGACCAGAAGACGAGGCTGAACCCGAGTCACCCTCTTCCAGCGATCAAGACAAAGATGAAGACTTTAATGCTTCTGGGTCACGGAAAAGGAAGGTGAAGAACAAAGGTTTGAAAATGAAAGCTAGAGTCTCTGGGAAGAAGCATGGTCGTAATTCAGAGTACGTTGATGATGATGAAGCTTTGATGCAGGCAATTGCTCTTTCCCTGCAAGACTCTTCAAAAGTATCATCTTGCTCTGACAAGAATGTAGAGAACATCGGCAAGGCTGAGAAAAAGGGAAGCATTCACATTCAAGAAGATAAGGGAAAAAAGAACAAAAAATCGTTTACTAGTCGGCTGCAAATGACTGAGGATGAACTCATTTTACACTTCTTCCAGCTTGATGAAGCAGGAAAAGGAACTGTAACCATAAGAGATTTAGAAAGGGCAGCTATAGCTCATGATTTTATATGGACAGACAAAGAGTTGGGTGATATGATTCGCTACTTTGATAGTGATGGAGATGGAAAGCTAAACCTCGATGATTTCCGGAAGATTGTTGTTCGTTGCAACATGATTAAAGGGTCTGAAAATTCTTGA 849 0.4299 MPKCDTSNSESEDACSNSESEETETVANGKPQQQGISEYEEQRLRRIAENKARLEALGLPQIASSLKSLPRNKKKKDKEKKKVEDEDEEYRPEDEAEPESPSSSDQDKDEDFNASGSRKRKVKNKGLKMKARVSGKKHGRNSEYVDDDEALMQAIALSLQDSSKVSSCSDKNVENIGKAEKKGSIHIQEDKGKKNKKSFTSRLQMTEDELILHFFQLDEAGKGTVTIRDLERAAIAHDFIWTDKELGDMIRYFDSDGDGKLNLDDFRKIVVRCNMIKGSENS* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01175 282 SUPERFAMILY EF-hand 197 271 IPR011992 -
Rops4g01175 282 ProSiteProfiles EF-hand calcium-binding domain profile. 241 276 IPR002048 GO:0005509
Rops4g01175 282 Gene3D - 158 281 - -
Rops4g01175 282 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 146 165 IPR003903 -
Rops4g01175 282 SMART efh_1 245 273 IPR002048 GO:0005509
Rops4g01175 282 Pfam EF-hand domain pair 210 270 IPR002048 GO:0005509
Rops4g01175 282 MobiDBLite consensus disorder prediction 1 145 - -
Rops4g01175 282 MobiDBLite consensus disorder prediction 1 38 - -
Rops4g01175 282 MobiDBLite consensus disorder prediction 96 118 - -
Rops4g01175 282 ProSitePatterns EF-hand calcium-binding domain. 254 266 IPR018247 -
Rops4g01175 282 MobiDBLite consensus disorder prediction 119 135 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01175 31 279 EF-hand Containing Proteins AT1G73440 41.600 4.69e-50 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01175 - - gmx:100806103 332.028