Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01174 ATGAGTTCCGGCGAGCTCCTCCAGATACATCCTCAGGAGCTGCAGTTTCCCTTTGAATTGAGGAAGCAGATCTCATGCTCTTTGCAGTTGTCTAACAAGACAGATAACTACGTGGCTTTCAAGGTTAAGACAACAAATCCAAAGAAGTATTGTGTTAGGCCCAACACTGGAGTTGTGTTGCCTCGGTCTACATGTGATATTATAGTGACAATGCAAGCCCAAAAGGAGTCACCTCCTGACATGCAATGCAAGGATAAGTTTCTCCTTCAAAGTGTAGTTGCAAGCCCTGGAGCAACCACAAAAGATATCACTCCAGAAGTGTTCAATAAAGAATCTGGCCATGATGTTGAAGAATGCAAATTGAGAGTTGTTTATGTTGCTCCTCCTCAACCACCATCCCCTGTTCGAGAAGGATCCGACGAAGATTCATCACCTCGAGCATCTGTATCAGAAAATGGGCATTCGAGTGCTTTGGAATTTCAGGCTGCTTCAAAAGCTTTCAATCAACAGGGTGAACTTAAGGACACTTCATTGCAGGCTAGAGCTCTCATTTCAAAGGTAACTGAGGAGAGGAATTCTGTTATTGAGCAAAATAAAAGGCTTCATCAAGAACTGGAGCTTTTGAAGCGTGAAGCCAACAGAAGCCGTGGTGGAATACCATTTATATATGTAGTTTTTGTTGGCTTGATTGGCATCATTTTGGGTTTCCTATTGAAGAGGACGTGA 726 0.4311 MSSGELLQIHPQELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSTCDIIVTMQAQKESPPDMQCKDKFLLQSVVASPGATTKDITPEVFNKESGHDVEECKLRVVYVAPPQPPSPVREGSDEDSSPRASVSENGHSSALEFQAASKAFNQQGELKDTSLQARALISKVTEERNSVIEQNKRLHQELELLKREANRSRGGIPFIYVVFVGLIGIILGFLLKRT* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01174 241 MobiDBLite consensus disorder prediction 127 154 - -
Rops4g01174 241 FunFam Vesicle-associated protein 1-1 1 129 - -
Rops4g01174 241 Pfam MSP (Major sperm protein) domain 7 110 IPR000535 -
Rops4g01174 241 ProSiteProfiles Major sperm protein (MSP) domain profile. 6 126 IPR000535 -
Rops4g01174 241 Coils Coil 184 215 - -
Rops4g01174 241 Gene3D Immunoglobulins 2 130 IPR013783 -
Rops4g01174 241 SUPERFAMILY PapD-like 2 140 IPR008962 -
Rops4g01174 241 PIRSF VAMP_assoc_prot 1 240 IPR016763 GO:0005789
Rops4g01174 241 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 5 237 IPR016763 GO:0005789
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01174 Rops-Chr4 31766296 31770106 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01174 - - gmx:100305725 427.943