Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01171 ATGAAGTTTGGAAAGAGACTGAAGCAACAGATTCAGGATTCGATGCCGGAATGGAGGGACAAGTTCTTGTCGTACAAGGAATTGAAGAAGCTTGTGAAGCTGATTTCGTTGGCTCCAACGTTGAAGAATGGGTCGTTGGAGTACGGCAAGGCAGAGGCTGAGTTTATGTATTTGTTGAACAATGAGATTGATAAGTTCAATGGCTTTTTCATGGAACAAGAAGAGGATTTCATTATCCTCCATAAGGAAGTACAACAGAGAATCAAGAGAGTGGTTGATTTATGGGGACCCAATGGTAGTCAGCCTTCAGAAGCTGATTATAAGGAAGAGATGGCAAAAATCAGAAAAGCTATTGTTGATTTCCATGGTGAAATGGTTCTCTTAGTAAACTACAGTAACATTAATTATACAGGGTTGGCTAAAATTCTGAAGAAATATGACAAGAGGACAGGGGGTCTCTTGCGTTTGCCATTCATTCAGAAAGTTCTGGTGCAGCCCTTTTTTACCACTGATCTAATTTCAAAACTTGTGAAGGAATGTGAAAGCATAATTGATGCAGTGTTCCCAGCTGAGGAAGAAGCTGAAAGGGCAAAAGAAGCAAAAGAAGCCATTGTAGTAGCTGGAGAAGGGATTTTCAGAAACACAGTTGCAGCTTTACTTACAATGCAAGAGATCAGAAAAGGTAGCTCTACAGAGAGTCCCTTTTCTCTGCCACCTCTCAATTTGCCAGACTCTGATCTCATCCAATCAATACATCTCAATGCTGCAGTGCCCATTGTCTAA 783 0.41 MKFGKRLKQQIQDSMPEWRDKFLSYKELKKLVKLISLAPTLKNGSLEYGKAEAEFMYLLNNEIDKFNGFFMEQEEDFIILHKEVQQRIKRVVDLWGPNGSQPSEADYKEEMAKIRKAIVDFHGEMVLLVNYSNINYTGLAKILKKYDKRTGGLLRLPFIQKVLVQPFFTTDLISKLVKECESIIDAVFPAEEEAERAKEAKEAIVVAGEGIFRNTVAALLTMQEIRKGSSTESPFSLPPLNLPDSDLIQSIHLNAAVPIV* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01171 260 ProSiteProfiles SPX domain profile. 1 160 IPR004331 -
Rops4g01171 260 PANTHER SPX DOMAIN-CONTAINING PROTEIN 3 1 242 IPR031142 GO:0016036
Rops4g01171 260 Pfam SPX domain 1 37 IPR004331 -
Rops4g01171 260 Pfam SPX domain 100 161 IPR004331 -
Rops4g01171 260 CDD SPX_AtSPX1_like 2 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01171 Rops-Chr4 31601541 31605951 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01171 - - gmx:100778590 442.965