Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01169 ATGTGGACACAGCAACTGCTACCTGTGACACCCCAGAAACTCTTCCTCCATTGTTCACCTCCAAATGTTCCAAAAAACCCATCTTTTGTGAAACTGTGTTGGACCCAGAATGGCAAAAATTGCCATAACAGAGTAAAGGCAATATCTTTGGATGAACTTCCCCCAAACGCACTTCGAAGAAAGAGAGAGCCACAATGGAGAGGAGGCTTCTCCATTGGAGTGGACTTGGGAATGGCTCGCACTGGACTTGCCATCAGCAAAGGCTTTTCTATTCGCCCTTTAACGGTTTTGCAACTGCGGGGACAGAAGCTCGAGGTCCATATTATTAATATTGCCAAACAAGAGGAGGCTGATGAGTTTATAATTGGACTTCCAAAATCTTCTGATGGGAAGGAAACACCACAGTCAAACATAGTCCGTAGTGTTGCAGGAAGGCTTGCTATTCGAGCTGCTGAGAGGGGTTGGAGAGTATATCTACAGGACGAACATGGGACAACAACAGAAGCGATGGATCGAATGGTCAACATGGGCTTAAGTAAGTCCTCTCAGCAGAAGAAACTTGATGCCTTTGCTGCCATGATGGTACTGGAGAGATATTTTTCCACGTCAGGTCAGGAAACTGAACTTGTTTTGCCAAGGAATCTAGAACTACAAGGAAAACTTCGAAGGGGTCCTCCCAAAGATGTTGACTTTTTCTCAGATGAAGATTAA 711 0.4501 MWTQQLLPVTPQKLFLHCSPPNVPKNPSFVKLCWTQNGKNCHNRVKAISLDELPPNALRRKREPQWRGGFSIGVDLGMARTGLAISKGFSIRPLTVLQLRGQKLEVHIINIAKQEEADEFIIGLPKSSDGKETPQSNIVRSVAGRLAIRAAERGWRVYLQDEHGTTTEAMDRMVNMGLSKSSQQKKLDAFAAMMVLERYFSTSGQETELVLPRNLELQGKLRRGPPKDVDFFSDED* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01169 236 NCBIfam Holliday junction resolvase RuvX 73 200 IPR005227 GO:0006364
Rops4g01169 236 CDD YqgF 72 200 IPR005227 GO:0006364
Rops4g01169 236 Hamap Putative pre-16S rRNA nuclease [yqgF]. 69 204 IPR005227 GO:0006364
Rops4g01169 236 SMART rnase_8s 69 169 IPR006641 GO:0006139
Rops4g01169 236 Pfam Holliday junction resolvase 71 201 IPR005227 GO:0006364
Rops4g01169 236 FunFam Holliday junction resolvase 71 208 - -
Rops4g01169 236 PANTHER POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN 50 220 IPR005227 GO:0006364
Rops4g01169 236 SUPERFAMILY Ribonuclease H-like 70 202 IPR012337 -
Rops4g01169 236 Gene3D - 71 209 IPR037027 GO:0006139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01169 - - gmx:100810356 382.104