Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01130 ATGGAAGTTTCTGATGCGGCGGTGAACCGGTTCGAACCGGGTTCGGATCACAAGAAGGAGAGCGGTTTGAGAGTTGAGATTGACACTTCGGCGCCGTTTGAGTCTGTTAAGGAGGCCGTTACCAGATTCGGTGGTGTTGGTTACTGGAAACCTATTACCAATCATAACAACAACAACATTAAACTCATGGATACTGAGCACCACACAGAAGAGCTTGACACTGGAAAACTGGAGGAGCAAGCAGCTGGATTGGAGAAAGAGCTGATCCTGAAAGAAAGGGAAACTCTTGATGTCTTAAAAGAGTTGGAAAGGACCAAAAAGCTTGTGGAAAATTTGAAATCAAAGCTACAGACAGAAGAATCTGAAGCCAATTTGAATATTCAAATGAGTGTATGTGATAATAATATGTTGTCTGTCAAGGAAAGTGAGAAAGAAGAAGAAAAGGAAAACCAAGTGAGTCATGTTTTTCAGCATTCAAAGGAAGGTTTAATATTAATGGAATTGAAGCAAGCAAAATTTAATCTGAACAGAACTACAAATGACATTGCTGATGTTCGAGTTTCTGTTGAATCACTCAATAAGAAGTTAGAGAAAGAAAGAATCTCACTTGAGAAAACCCGTGAGAGGTTAACTCAGAATTCTTCAAAGATATCTTGTCTGGAGGAAGAGCTAAACCAGACAAGACAGAAACTGCAAGTGGCCAAAGATGCTGAAATCAAAGGTGAAGGTGATCCTTTGGATATTACAAGAGAGCTCCAGCGATTGAGTTCCGAGACAGAGCATTTCAAGAAAATGGGAGAAGTTGCGAAATCAGAAGTCTTGAGAGCAATGTCTGAGATTGAACAAACAAAAGCTATGATAAGAACTGCTGAAATCAGGTTGGTTGCTGCTAGAAAAATGAAGGAAGCTGCTAGAGCAGCAGAAGCTGCTGCCCTTGCAGAGATCAAAGCTTTATCTCATCACCAGAATTCACCTGAAGATTGTATGCAAAAGCATGATGGAATTACTCTTTCCATGGAAGAGTATACCACTCTTACCTGCAAAGCTCGAGATGCCGAGGAAAAATCAAGGAAGAGAGTACTAGATGCCATGCTTCAAGCTGATGAAGCAAATTTATCAAAAATGGACATCTTAAAAAGGGTAGAGGAAGCTGCAGAAGAAGTTAAAACAAGCAAGAAGGCCCTTGAAGAAGCTCTTGAAAGGGTAGAGGCTGCAAATAAAGGAAAACTAGCAGTTGAAGAGGCTTTAAGGAAGTGGAGGTCCGAGGGTCATAAAAGACGTTCTTCTATACATAACTCTACCAAGTTCAAAAATCCTTACCCCTCTCATTATAGGAGAGATTCTCGGTTATTTGATATGAATGGGCTGAATCCGGTAAATGATGAGTCCAATCCAGTTCTAAAGCCAACCCTGTCTATAGGGCAAATATTGAGCAGGAAGCTGATGATGCCAGAAGAGTTTGAAGCCGGGATGCTTAGAGAAAGAAGTTCGGTGAAACGGAAGGTATCATTGGGTCAGATGCTAGGCAAACAAAACTATGATCCATCCTTTGAGAGACAAGTTGAGAAAGAAAATGGGCAGAAGCAGTTTTCTGCAAAGAGAAAGAAATTTGGATTTGCTAGATTCTCCCTTCTTTTGACCAAACAACAAAAGAAGAAGAAGCCAACACTGAACTTGAGGTGA 1683 0.4082 MEVSDAAVNRFEPGSDHKKESGLRVEIDTSAPFESVKEAVTRFGGVGYWKPITNHNNNNIKLMDTEHHTEELDTGKLEEQAAGLEKELILKERETLDVLKELERTKKLVENLKSKLQTEESEANLNIQMSVCDNNMLSVKESEKEEEKENQVSHVFQHSKEGLILMELKQAKFNLNRTTNDIADVRVSVESLNKKLEKERISLEKTRERLTQNSSKISCLEEELNQTRQKLQVAKDAEIKGEGDPLDITRELQRLSSETEHFKKMGEVAKSEVLRAMSEIEQTKAMIRTAEIRLVAARKMKEAARAAEAAALAEIKALSHHQNSPEDCMQKHDGITLSMEEYTTLTCKARDAEEKSRKRVLDAMLQADEANLSKMDILKRVEEAAEEVKTSKKALEEALERVEAANKGKLAVEEALRKWRSEGHKRRSSIHNSTKFKNPYPSHYRRDSRLFDMNGLNPVNDESNPVLKPTLSIGQILSRKLMMPEEFEAGMLRERSSVKRKVSLGQMLGKQNYDPSFERQVEKENGQKQFSAKRKKFGFARFSLLLTKQQKKKKPTLNLR* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01130 560 MobiDBLite consensus disorder prediction 1 22 - -
Rops4g01130 560 Gene3D - 163 336 - -
Rops4g01130 560 Pfam Weak chloroplast movement under blue light 141 426 IPR008545 -
Rops4g01130 560 Pfam Weak chloroplast movement under blue light 25 123 IPR008545 -
Rops4g01130 560 Coils Coil 99 122 - -
Rops4g01130 560 Coils Coil 74 94 - -
Rops4g01130 560 Coils Coil 175 237 - -
Rops4g01130 560 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 25 130 - -
Rops4g01130 560 MobiDBLite consensus disorder prediction 424 443 - -
Rops4g01130 560 Coils Coil 378 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01130 Rops-Chr4 30691846 30694561 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01130 - - gmx:100783770 779.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02071 8 48409384 48412407 Rops4g01130 4 30691846 30694561 PCT