Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00990 ATGACCATGGTTGGAAAATCCATGGCCGCGACTTCACGTGAAAGGCTCGCGAGTCTCGTGAGCTCTGCCAAATTGGCCAATGACATACCTTCAAAGCTCGAATTTCTGCGCCAATTGAGACGCGAATTTCCTCAGGAAGACCCTGTTCTTCTCACTGAGTTCCTGCCTTCGCTCTTTGAGTTCCTCTCTGATCGCTTCAGTCCCGTTCGCAAATTCGTCACCGAGATGGTTGGTGAAATTGGATTGAACAACACGGAGTTCTTGCCGGAGATTGTGCCTGTGCTGATTGATGTATTGGATGATGATACGCCGGCGGTTGTTCGCCAAGCTATAATGTGTGGAATCGATTTGTTTCGCTCCACGCTCGAGAAAATTGCAATTCAGGGTCTATATTCTAGTGATTTAGACAGTGCACTTGAATCTGCATGGGCATGGATGGTTAAATTCAAAGACAAAGTATACTCAATAGCTTTTCAACATGGAAGTGGTGGTGCAAAGCTGCTGGCACTGAAGTTTGTTGAAGCAGTTATTCATCTTTACACACCTGATCCTAATGGTTCCTCGGAGCCCACTTCTCATCAAGGAAGGCCCATGGAATTTAATATATCATGGCTGAGGAGGGGTCATCCCGTACTTAATGTTGGAGATTTGTCAATTGAAGCCAGTCATAGTTTGGGTCTCTTGCTTGATCAACTCAGATTTCCTACTGTGAAGTCTCTTAGTAACTCAGTGGTCATTGTGCTAATTAAAAGCCTTTCAGCCATTGCAATAAACAGGCCTGCATTCTATGGACGTGTCTTGCCAGTTTTGCTCAGTTTGGAACCCTCAAGCTCTGTTATTAATGGGGTCTGTGTATCAGCTGCACATCTTGCTTTGAAGAATGCCTTTCTTACCTGCTCGAAATGCACACATCCAAGTGCTGCTCCGTGGAGAGATCGTTTGGCTGGTGCCTTGAAGGAGATGCAGTCTGAAGGGAAGGCAGATCAGGTGTTCCACCCAATCTCTGCAAGTAATGGAAGTATACAGAGAGAGAAGGATGATCAACCAGTTATCAAGGAAGAGGAACCTGCTGTAAATTCATGTGTTCCAGTGCACAGTAATTTGGCAAGAAAACGATCAGGATCACAAAATGGAGGTGATTTAGCTGAAGATGATGTGCCAGGAAAACGTGTCAGAACAACAATCGTTAGTTCAAAAGAACCTAAGAAAGAGTTAGATGAAGGTACTGTTAACTCTCAGGATGGCTCTCCTTTAACTGTACCAACATCTTCGAAAGGAGATGTGGATAATGGACCGGTGCAGCAACTTGTTGCCATGTTTGGTGCTTTGGTTGCTAAAGGTGAAAAAGCTGTTGCATCTTTGGAAATTCTTATCTCAAGTATTTCTGCTGACTTGCTAGCTGAGGTGGTAATGGCAAATATGTGTCACCTACCTCCAAGTTACCCTAATGCTGAAGGAGATGATGAACAATTGCATGACATCAGCATAGTTGGTTCTGATGACAAGGCTAAATATCCACCATCATTTGTAGCTGGTGTTATGTCACTTTCTAGTACTTTTCCACCAGTTGCTTCACTTCTTGATGCTCATCAATCAGTGTCCAATGATGTAGTGAAGTCTCATGGGGAGGAAGAAATTTCTGCAACTGGAGTAGATAGCGGTGTGCATTCTGGCATGAATCTTTCATCTGAAAATGTACCGTCACCTACCAATTTTCCATCTTCTGATGCCTGTATACCTGGAGTGGAGAATGACAGCAGCATAACTATGCCTTCTGTCATCCATGATGTTGGAAACTTAGAGAGTGGAATCCCTGGTCTGGATTCTTTTGGTCATGGTAATACCTTGTCAGAAACCTTGGCCACTTCGTCGGCTTCCTCTGAGAGACAACCAGAAGATGCCAATCAAGAGCAAGTTACAAGTTTGGAGCAAAGGTCACCCCTGAACTTAGTTCCATCAATATCAACAGATAAATCCGAGGAGCTGAGCCCAAAAGCAGCTGTTACAGGTGTCAATAGCCTGGTGTCGTCAACAGCTACTTCAGTTGTGATGCCTTCCCGTTTAGTCCTGCCAAAGATGATTGCTCCTGTTATTGATCTTTCAGATGAACAGAAGGATCATTTGCAAAAGTCATGTTTTATGCGAATCATTGATGCATATAAACAAATAGCTGTAGCTGGAGGGTCAGAAGTTAGATTTTCAATACTTGCTTGTTTAGGAGTTGAGGTGAAAATTCCAGCTTCTCAAAATTTTCAGCTTCCATTGGAACTAGACCCATGGAAATTATTACAGAAGCATATTTTGATTGATTACACTAGTCATGAGGGGCACGAGTTGACATTGCGTGTCCTCTACAGGTTATTTGGTGAGGCTGAAGAGGAGCCTGACTTCTTTTCTTCCACAACTGCAGCTTCTGTATATGAAACATTCCTCCTAACTGTGGCAGAAGCACTTAGAGATTCCTTTCCACCTTCAGATAAATCATTAAGCAAATTGCTTGGTGAATCTCCTTATTTGCCGAAATCAGTTTTAAAAATTTTAGAAAGCATGTGTTCTCCTGGAAATGGGGATAAAGATGAAAAGGAATCACACTCAATGAATGCGGATAGAGTTACTCAAGGTCTAAGTACTGTGTGGAGTTTGATTCTTCTAAGACCTCCCATTCGAGATACTTGTTTAAAAATTGCTTTACAGAGTGCAGTGCATCACTTGGAAGAAGTGCGTATGAAGGCAATACGTCTGGTGGCAAATAAGCTTTATCCTTTATCATCCATTTCTCAGCAAATAGAAGATTTTTCAAAGGAAATGCTGTTCTCAGTGATGAGTGGTGATGCATCTGAAGCTACTGATGCTGAAGGGTCCATTCCTGATTCACAAAAGGGACCTGATATCAAAAAGCTTCCAAATGAACCATCATCATTGAGTGGCAGCACTAAGGATGTCTCCCCAGATAATTGCCAATCATCCACATCTGAGGGTGTCTCGCCGGATTCAGTTTCTGAGGCTCAGAGGTGCATGTCGTTGTATTTTGCTTTGTGCACAAAGAAACATTCTCTCTTCCGCCAAATATTTGTCATCTATAAAAGCACATCAAAGGCAGTGAAGCAGGCAGTTCATCGTCAAATTCCTGTACTTGTGCGTACTATGGGCTCATCTTCAGATCTCCTTGAAATTGTTTCGGATCCCCCAAATGGAAGCGAGAATCTCCTACTGCAGGTGTTACATACACTTATGGATGGTACAATCCCTTCTAAGGACTTGATATTTACTGTGAAAAGGTTACATGATTCAAAACTTAAGGATGCAGAGGTTCTTATTCCAATATTACCATTCCTACCAAAAGATGAGGTAATGCCGGTTTTTCCTCAAATTGTGAATCTTCCTTCGGAGAAGTTCCAAGCAGCACTTGGTCGCATACTGCAGGGATCATCACAATCTGGTCCGGTGCTAACTCCGGCTGAAGTTTTAATTTCAATCCATGGAATTGATCCTGAAAGAGATGGAATTCCCTTAAAAAAGATAACAGATGCATGCAATGGTTGCTTTGAGCAGCGACAAATTTTTACTCAAGAAGTTCTTGCAAAAGTTTTGAATCAATTGGTTGAGCAGATTCCTCTTCCTTTGCTGTTCATGCGTACAGTATTACAAGCAATTGGTGCTTTTCCAACACTAGTGGACTTTATAATGGGGATTCTTTCTCGCCTTGTGAGGAAGCAGATATGGAAATACCCGAAGTTGTGGGTGGGATTCTTGAAGTGTGTGCAGTTGACAAAACCTCAATCATTTGGTGTTTTACTTCAGCTACCTCCAGCACAATTGGAAAATGCATTAAATAGAACTGCGGCACTGAAGGCACCATTGATAGCTCACGCTAGCCAGCCAGATATACAATCTTCGCTTCCCAGGTCTGTGCTGGCTGTTCTTGGCATTGCTTCCGATTCACAGGTTTCTAGTCAGGCACAAACTAGTCATACACAGACTGGTGAGACAAGCAACTCAGATAAGGACACAGTGACAGAAAAATCTAAAGAATCATCTACAGCGAGCTAA 4050 0.4274 MTMVGKSMAATSRERLASLVSSAKLANDIPSKLEFLRQLRREFPQEDPVLLTEFLPSLFEFLSDRFSPVRKFVTEMVGEIGLNNTEFLPEIVPVLIDVLDDDTPAVVRQAIMCGIDLFRSTLEKIAIQGLYSSDLDSALESAWAWMVKFKDKVYSIAFQHGSGGAKLLALKFVEAVIHLYTPDPNGSSEPTSHQGRPMEFNISWLRRGHPVLNVGDLSIEASHSLGLLLDQLRFPTVKSLSNSVVIVLIKSLSAIAINRPAFYGRVLPVLLSLEPSSSVINGVCVSAAHLALKNAFLTCSKCTHPSAAPWRDRLAGALKEMQSEGKADQVFHPISASNGSIQREKDDQPVIKEEEPAVNSCVPVHSNLARKRSGSQNGGDLAEDDVPGKRVRTTIVSSKEPKKELDEGTVNSQDGSPLTVPTSSKGDVDNGPVQQLVAMFGALVAKGEKAVASLEILISSISADLLAEVVMANMCHLPPSYPNAEGDDEQLHDISIVGSDDKAKYPPSFVAGVMSLSSTFPPVASLLDAHQSVSNDVVKSHGEEEISATGVDSGVHSGMNLSSENVPSPTNFPSSDACIPGVENDSSITMPSVIHDVGNLESGIPGLDSFGHGNTLSETLATSSASSERQPEDANQEQVTSLEQRSPLNLVPSISTDKSEELSPKAAVTGVNSLVSSTATSVVMPSRLVLPKMIAPVIDLSDEQKDHLQKSCFMRIIDAYKQIAVAGGSEVRFSILACLGVEVKIPASQNFQLPLELDPWKLLQKHILIDYTSHEGHELTLRVLYRLFGEAEEEPDFFSSTTAASVYETFLLTVAEALRDSFPPSDKSLSKLLGESPYLPKSVLKILESMCSPGNGDKDEKESHSMNADRVTQGLSTVWSLILLRPPIRDTCLKIALQSAVHHLEEVRMKAIRLVANKLYPLSSISQQIEDFSKEMLFSVMSGDASEATDAEGSIPDSQKGPDIKKLPNEPSSLSGSTKDVSPDNCQSSTSEGVSPDSVSEAQRCMSLYFALCTKKHSLFRQIFVIYKSTSKAVKQAVHRQIPVLVRTMGSSSDLLEIVSDPPNGSENLLLQVLHTLMDGTIPSKDLIFTVKRLHDSKLKDAEVLIPILPFLPKDEVMPVFPQIVNLPSEKFQAALGRILQGSSQSGPVLTPAEVLISIHGIDPERDGIPLKKITDACNGCFEQRQIFTQEVLAKVLNQLVEQIPLPLLFMRTVLQAIGAFPTLVDFIMGILSRLVRKQIWKYPKLWVGFLKCVQLTKPQSFGVLLQLPPAQLENALNRTAALKAPLIAHASQPDIQSSLPRSVLAVLGIASDSQVSSQAQTSHTQTGETSNSDKDTVTEKSKESSTAS* 1350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00990 1349 MobiDBLite consensus disorder prediction 383 409 - -
Rops4g00990 1349 MobiDBLite consensus disorder prediction 362 429 - -
Rops4g00990 1349 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN-RELATED 3 1340 - -
Rops4g00990 1349 Gene3D - 2 348 IPR011989 -
Rops4g00990 1349 MobiDBLite consensus disorder prediction 970 997 - -
Rops4g00990 1349 MobiDBLite consensus disorder prediction 605 662 - -
Rops4g00990 1349 MobiDBLite consensus disorder prediction 1313 1333 - -
Rops4g00990 1349 MobiDBLite consensus disorder prediction 947 997 - -
Rops4g00990 1349 SUPERFAMILY ARM repeat 34 1055 IPR016024 -
Rops4g00990 1349 Pfam Symplekin/PTA1 N-terminal 104 322 IPR032460 -
Rops4g00990 1349 MobiDBLite consensus disorder prediction 612 662 - -
Rops4g00990 1349 Pfam Symplekin tight junction protein C terminal 1101 1279 IPR022075 -
Rops4g00990 1349 MobiDBLite consensus disorder prediction 324 349 - -
Rops4g00990 1349 MobiDBLite consensus disorder prediction 410 429 - -
Rops4g00990 1349 MobiDBLite consensus disorder prediction 1313 1349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00990 Rops-Chr4 26833859 26858103 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00990 K06100 - gmx:100779360 2130.52