Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00982 ATGGCCGTCGTTGGAGTCCTCGCTTTACAAGGATCTTTCAACGAACACATAGCAGCTCTCAGGAGGTTAGGGGTGAAAGGTGTGGAGATTCGGAAGCCGGAGCAGCTTCTCACTGTGAATTCCCTCATCATCCCTGGTGGAGAAAGCACCACCATGGCTAAGCTTGCTGAGTACCATAACCTGTTTCCTGCCTTACGAGAGTTTGTACAAATGGGAAAGCCTGTTTGGGGAACCTGTGCAGGGCTAATATTCTTGGCAAATAATGCTGCAGGACAGAAAACTGGTGGACAACAACTGGTTGGTGGGCTTGATTGTACTGTGCATAGAAATTTCTTTGGCAGCCAGATTCAAAGCTTTGAGGCAGCACTTTCAGTGCCAGAGCTTGCATCCAAGGAAGGTGGTCCTGAAACATATCCTGGGATTTTTATTCGTGCCCCAGCAATTCTTGAAGTAGGGCAAGAAGTTCAAGTGCTGGCTGATTATCCTGTACCTTCTAACAGATTATCAAGTTCTGATTCCTCTATTGATGACAAAAAGGATAATGCTGAGGGAGAAAGTAAAGTTATAGTTGCTGTGAGACAAGGAAACATATTGGGGACTGCATTTCATCCTGAATTGACAGCTGATACTCGATGGCATAGTTATTTCTTGAAGATGGCAAATGTGATTGGAGAAGAGTCCTCAAATAGCCTTGTTCCAGCACAAGTCAGTACAAGTTATAACCAACAGCCACAGAATGTGCTTCCCATCTTTCAATAG 759 0.4493 MAVVGVLALQGSFNEHIAALRRLGVKGVEIRKPEQLLTVNSLIIPGGESTTMAKLAEYHNLFPALREFVQMGKPVWGTCAGLIFLANNAAGQKTGGQQLVGGLDCTVHRNFFGSQIQSFEAALSVPELASKEGGPETYPGIFIRAPAILEVGQEVQVLADYPVPSNRLSSSDSSIDDKKDNAEGESKVIVAVRQGNILGTAFHPELTADTRWHSYFLKMANVIGEESSNSLVPAQVSTSYNQQPQNVLPIFQ* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00982 252 PANTHER PYRIDOXAL 5'-PHOSPHATE SYNTHASE SUBUNIT SNO 1 221 IPR002161 GO:0004359|GO:0042819|GO:0042823
Rops4g00982 252 Gene3D - 1 229 IPR029062 -
Rops4g00982 252 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 3 229 - -
Rops4g00982 252 NCBIfam pyridoxal 5'-phosphate synthase glutaminase subunit PdxT 4 161 IPR002161 GO:0004359|GO:0042819|GO:0042823
Rops4g00982 252 ProSitePatterns PdxT/SNO family family signature. 41 51 IPR021196 -
Rops4g00982 252 CDD GATase1_PB 4 217 IPR002161 GO:0004359|GO:0042819|GO:0042823
Rops4g00982 252 Pfam SNO glutamine amidotransferase family 6 219 IPR002161 GO:0004359|GO:0042819|GO:0042823
Rops4g00982 252 SUPERFAMILY Class I glutamine amidotransferase-like 3 219 IPR029062 -
Rops4g00982 252 FunFam Predicted protein 1 230 - -
Rops4g00982 252 Hamap Pyridoxal 5'-phosphate synthase subunit PdxT [pdxT]. 4 219 IPR002161 GO:0004359|GO:0042819|GO:0042823
Rops4g00982 252 ProSiteProfiles PdxT/SNO family profile. 3 221 IPR002161 GO:0004359|GO:0042819|GO:0042823
Rops4g00982 252 PIRSF Glut_amidoT_SNO 1 223 IPR002161 GO:0004359|GO:0042819|GO:0042823
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00982 K08681 - gmx:100786227 426.787