Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00653 ATGTCATCATCCATGGATGTTCATGATGGCAAGCTCTTCAACACTAACACTGTTGTCCTCCTTGTTGCCACTATTGTTGTGGCTAAACTCATCTCATCTTTCATAATACCCAAATCCAGAAAGAATCTCCCCCCAGTTGTTAAAGGGTTACCCATAATTGGAGGGTTGCACCGTTTTCTCAAAGGTCCAATTTTTATGCTCCGTGAGGAGTACCCAAAACTTGGTAGTGTCTTCACCTTGAAATTGTTTCACAAAAACATCACCTTTTTTATTGGTCCTGAGGTCTCTGCACACTTTTTCAAGGCCCCAGAATCTGATCTTAGTCAGCAAGAGGTGTATCAGTTCAATGTGCCTACTTTTGGACCTGGGGTGGTGTTTGATGTTGATTATTCTGTGAGGCAGGAGCAGTTTAGGTTCTTCACTGAGGCTCTTAGAGTGACTAAACTCAAGGGTTATGTTAATCAGATGGTTGTGGAAACTGAGGACTATTTCTCAAAGTGGGGATCAAGTGGTGAGGTTGATTTGAAGTATGAGCTTGAGCATCTGATTATCTTGACTGCCAGTAGATGTCTGTTGGGGCGTGAAGTTCGTGACAAGCTCTTTGATGATGTCTCTGCATTGTTCCATGACCTTGACAATGGGATGCTTCCAATCAGTGTTCTCTTCCCATACCTGCCTATCCCAGCTCACAAGCGTCGTGACCAAGCCCGCAAGAAGCTTGCTGAAATCTTTGCAAGCATCATAGCTTCTCGCAAAAGTGCCAACGAATCAGAAGATGACATGCTGCAGTGCTTCATTGACTCAAAATACAAAGATGGTCGCCCAACAACAGAAGTTGAAGTCACTGGACTCCTCATTGCTGCACTTTTTGCTGGGCAGCACACCAGTTCAATCACCTCCACTTGGACTGGAGCATATCTCTTGTGTAACAACCAGTACCTTTCTGCTGTGTTGGAGGAACAGAAGACGTTGATGGAGAAGCATGGAGACAAAGTTGATCATGATGTTTTGGCTGAGATGGATGTCCTGTATCGGTGCATCAAAGAAGCCCTGAGACTCCACCCTCCATTGATTATGCTGCTGCGAAGCTCACATAGTGATTTTAGTGTCAAGACAAGAGAGGGGAAAGAATATGACATTCCCAAGGGTCATATAGTTGCTACATCCCCTGCTTTTGCAAACCGACTAGGTCACATTTTCAAGGACCCTGATAGGTATGATCCTGACCGGTTTGCTGTTGGAAGGGAAGAAGACAAGGTGGCAGGGGCATTCTCATACATTTCCTTTGGAGGGGGCAGACATGGATGCCTTGGAGAGCCTTTTGCATATTTGCAGATAAAAGCAATATGGAGTCATTTGCTGAGGAACTTTGAACTGGAGTTGGTGTCGCCTTTTCCTGAGATTGATTGGAATGCCATGGTTGTGGGAGTGAAAGGAAAAGTGATGGTCCGATATAAGAGGAGGGAGCTTTCTGTTAATCAATAG 1485 0.4485 MSSSMDVHDGKLFNTNTVVLLVATIVVAKLISSFIIPKSRKNLPPVVKGLPIIGGLHRFLKGPIFMLREEYPKLGSVFTLKLFHKNITFFIGPEVSAHFFKAPESDLSQQEVYQFNVPTFGPGVVFDVDYSVRQEQFRFFTEALRVTKLKGYVNQMVVETEDYFSKWGSSGEVDLKYELEHLIILTASRCLLGREVRDKLFDDVSALFHDLDNGMLPISVLFPYLPIPAHKRRDQARKKLAEIFASIIASRKSANESEDDMLQCFIDSKYKDGRPTTEVEVTGLLIAALFAGQHTSSITSTWTGAYLLCNNQYLSAVLEEQKTLMEKHGDKVDHDVLAEMDVLYRCIKEALRLHPPLIMLLRSSHSDFSVKTREGKEYDIPKGHIVATSPAFANRLGHIFKDPDRYDPDRFAVGREEDKVAGAFSYISFGGGRHGCLGEPFAYLQIKAIWSHLLRNFELELVSPFPEIDWNAMVVGVKGKVMVRYKRRELSVNQ* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00653 494 PRINTS E-class P450 group IV signature 282 308 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g00653 494 PRINTS E-class P450 group IV signature 436 454 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g00653 494 PRINTS E-class P450 group IV signature 340 356 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g00653 494 PRINTS E-class P450 group IV signature 394 412 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g00653 494 PRINTS E-class P450 group IV signature 420 436 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g00653 494 PRINTS E-class P450 group IV signature 65 88 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g00653 494 PRINTS E-class P450 group IV signature 378 392 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g00653 494 SUPERFAMILY Cytochrome P450 39 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g00653 494 Pfam Cytochrome P450 44 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g00653 494 PRINTS P450 superfamily signature 345 356 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g00653 494 PRINTS P450 superfamily signature 427 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g00653 494 PRINTS P450 superfamily signature 436 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g00653 494 PRINTS P450 superfamily signature 291 308 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g00653 494 PANTHER CYTOCHROME P450 FAMILY 7 21 489 - -
Rops4g00653 494 CDD CYP51-like 71 471 - -
Rops4g00653 494 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 429 438 IPR017972 GO:0005506|GO:0016705
Rops4g00653 494 Gene3D Cytochrome P450 33 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g00653 494 FunFam Cytochrome p450 51g1 40 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00653 Rops-Chr4 17431437 17434088 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g00653 9 491 Miscellaneous Gene Families AT1G11680 81.443 0.0 820
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00653 K05917 - gmx:100810799 884.019