Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00648 ATGGTGAAACACATTGTTGACATTCGAGTTCTAGAAGACTTAAGGTTGTCTGAGTGTAGCATCTACAAGGTTCCTTACAATCTTAGGAAGGTGAATGAGGAAGCTTATACTCCTCACTTTATATCAATAGGTCCCATTCACCTTGACAAAGAAGAACTGAAAGCAATGCAAGAACACAAAAAAAGATACTTTCATTTCTTCTGGGAACGTGTATCCAATGAACATGCCATGAGGGACTATAAAAACTATTTGGAAAGCAAAGAAGAAGAAATAAGGCAATGTTATGCTGAGAAATTCCCTGGCTTCAGCAAGGAGAAGTTCATTGACATGATGCTGTTGGATGCTGTGTTCATCATGGAGCTCTTTCTGAGGAACAGTTCATGGAAATCAGATACATTCAAACATGAGCATGATTATGTGCAAACCAAGTCATTTAGATTGAAGCACAGTGATGATTTCATCTTGACAATGTCATGGCTCAGCAAGAACATCTCAAAGGACTTGATCCTGTTGGAAAATCAGATACCCTTTTTTGTGCTGAAGAAACTGTATGAGTCTGTGGTCCCTGGTGATGAAAAGAAGAAAGAACATGATTGCTTTGTTGATCTTGCACTTGAGTACTTTGCATTTTATGACACTCAGAGATCTTCTTCTGATGAAACCAAGTTAATTATGCACAAGAACAGGTCCAAGAAATATTTTTTGAGTGGTTCACTTGGTGGTGGTAATTCCAAGAAACCTTCTCATAAATCCATGAACAAAGATAGGTGTAAAAGCCCCAAACATTTCACTGATTTGATAAGGTATTTTTACCTTCCTACTGTTTTGGGAAAAAGTGGTTGCTCTCATCGTGTCCTAAGAACTGCAACAAAGTTGCAAGACTCTGGGGTGTGCTTTGAGAAAGATGTCAAAAGAAGGTTACTTGACTTAACTTTTGACAAGAAGCCATTTTTGAGTTCATTTGTTTGCTTGGGTTGCTTGCCATATGTGAACCATTTCAAAGCACGTTTTAGGATACCCCAATTGAAGGTGGACCACACAACAGAATGTGTTCTGAGGAACCTCATTGCTCTTGAGCAGTGGCACTATCCAGAACAACCTTATATATGTAACTATGTTTCTTTATTGATTCTCTCATCCACACTCAGCTTGATGTGGAGTTGCTGGTTGAGAAGGAAGTCATTGTCCATGAACTGGGTAGTGACAAGGAAGTGGCAACTCTTGTTAATGGTCTTTGCAAACATGTAG 1248 0.3894 MVKHIVDIRVLEDLRLSECSIYKVPYNLRKVNEEAYTPHFISIGPIHLDKEELKAMQEHKKRYFHFFWERVSNEHAMRDYKNYLESKEEEIRQCYAEKFPGFSKEKFIDMMLLDAVFIMELFLRNSSWKSDTFKHEHDYVQTKSFRLKHSDDFILTMSWLSKNISKDLILLENQIPFFVLKKLYESVVPGDEKKKEHDCFVDLALEYFAFYDTQRSSSDETKLIMHKNRSKKYFLSGSLGGGNSKKPSHKSMNKDRCKSPKHFTDLIRYFYLPTVLGKSGCSHRVLRTATKLQDSGVCFEKDVKRRLLDLTFDKKPFLSSFVCLGCLPYVNHFKARFRIPQLKVDHTTECVLRNLIALEQWHYPEQPYICNYVSLLILSSTLSLMWSCWLRRKSLSMNWVVTRKWQLLLMVFANM* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00648 415 Coils Coil 77 97 - -
Rops4g00648 415 Pfam Plant protein of unknown function 21 376 IPR004158 -
Rops4g00648 415 PANTHER BNAC04G53230D PROTEIN 14 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00648 Rops-Chr4 17367249 17369693 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00648 - - gmx:100804317 574.704