Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00635 ATGGCACATGCTAATACTGATTTTGGTGTATCTGAAGCCGAAGTTGACATGGTGAAACACATTGTTGACATTCGAGTTCTAGAAGACTTAAGGTGGTCTGAGCGTACCATCTACAAGGTTCCTTACAATCTTAGGGAGGAGAATGAGAAAGCTTATACTCCACACTTTATCTCAATAGGTCCCATTCACCTTGACAAAGAAGAACTGAAGGCATTGCAAGAGCACAAAAAAAGTTACTTCCATTTCTTCTGGGAACGTGTATCCAATGAACATGCCATGAGGAACTATAAAAACTATTTGGAAAGCAAAGAAGAAGAAATAAGGCAATGTTATGCTGAGAAATTCCCTGGCATCAGCAAGAAAAAGTTCATTGACATGATGCTGTTGGATGCTGTCTTCATCATGGAGCTCTTTCTGAGGAACAGTTCATGGAAATCCGAGTCATTTAGATTGAAGCAGAGTGATGATTCGATTTTGACAATGCCATGGCTTAGCAAGAACATCACAAGGGACTTGATCCTGTTGGAAAATCAGATACCCTTTTTTGTGCTGAAGGAACTGTATGAATCTGTGGTCCCTAATGATTGCAAGAAAGAACATGCTTGCTTTCTTGATCTTGCACTTGAGTACTTTGCATTTTATGACGCTCAGAAATCTTCTTCTGATGAAATCAAGTTGATTCTGCACAACAACCGGTCAAAGAAATGCGAACCCAAACATTTTACTGATTTGATAAGGTGTTTTTACCTTCCTACTGTTTTGGGCAAAAGTGGTTGCTCTCAATATGTCCCAAGAACTGCAACAAAGTTGCAAGAATCTGGGGTGTGCTTTGAGAAAGATGTCAAAAGAAGGTTACTTGACATAAATTTTGTCAAGAAGCGATTTCTGGGTTCATTTGTTTGCTTGGATTGCTTGCCATATATGAACCATTTCAAAGCACGTTTTAAGATACCCCAATTGAAGGTGGACCACACAACAGAATGCGTTCTGAGGAACCTCATTGCTCTTGAGCAGTGTCACTATCCAGAACTACCTTATATGTGTAACTATGTTTCTCTTATTGATTCTCTCATCCACACTCAGCTTGATGTGGAGTTGCTGGTTGAGAAGGAAGTCATTGTGCATGAACTGGGTAGTCACAAGGAAGTGGCAACTCTTGTTAATGGTCTTTGCAAACATGTTGTGGCAAACACAACATGTTACTATGATACTATAGATAAGCTCGATAAGCATTACCAAAACTTTTGGAATCGTACCATGGCTACATTGTGGTTAGTGTATTTCAGAGACCCTTGGAGAGCAAGTTCCACTGTGGTTGGGATTGCTGTGCTTATTTTTGCTGTATTCAACTTCCTCCGTATTGTTCGGTATGTCATCTAA 1380 0.3986 MAHANTDFGVSEAEVDMVKHIVDIRVLEDLRWSERTIYKVPYNLREENEKAYTPHFISIGPIHLDKEELKALQEHKKSYFHFFWERVSNEHAMRNYKNYLESKEEEIRQCYAEKFPGISKKKFIDMMLLDAVFIMELFLRNSSWKSESFRLKQSDDSILTMPWLSKNITRDLILLENQIPFFVLKELYESVVPNDCKKEHACFLDLALEYFAFYDAQKSSSDEIKLILHNNRSKKCEPKHFTDLIRCFYLPTVLGKSGCSQYVPRTATKLQESGVCFEKDVKRRLLDINFVKKRFLGSFVCLDCLPYMNHFKARFKIPQLKVDHTTECVLRNLIALEQCHYPELPYMCNYVSLIDSLIHTQLDVELLVEKEVIVHELGSHKEVATLVNGLCKHVVANTTCYYDTIDKLDKHYQNFWNRTMATLWLVYFRDPWRASSTVVGIAVLIFAVFNFLRIVRYVI* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00635 459 Coils Coil 93 113 - -
Rops4g00635 459 Pfam Plant protein of unknown function 37 445 IPR004158 -
Rops4g00635 459 PANTHER BNAC04G53230D PROTEIN 27 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00635 Rops-Chr4 17028925 17030304 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00635 - - gmx:100804317 668.307