Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00561 ATGGCTAGAGCAATGGTGGCTTCTTTCATGGTTCTGCTTCTGGCTTTTCCCACTGTATTTGGAACTGATTATACTGTTGGTGATTCCAGTGGATGGACCCAAGGGGTTGATTATGGTACCTGGGCTTCTGGGAAAACTTTCAAAGTTGGTGATAATTTGGTGTTCCCTTATGGCCCAAGCCACCAAGTGGATCAAGTTGATGAGAATGGCTACAAAAGCTGCAGTTCAAGCAATGTCCTCAAAAACTACAATGATGGAAACTCCAAGATTGCATTGTCCAAAACTGGCAAAATGTACTTCATATGCCCAACATCAGGTCACTGTGGTAGTGGCATGAAACTTGAAATCAATGTTGTTGCTGCTAGCACCACCCCAAGTGGCAGCCCCCCAAAATCTCCAAGTGGCACCCCACCAACCACACCAAGTGGCACTCCACCAACTACCCCATCTTCTCCCTCAGGCACTACTTCAAACACAACTTCTTCTCCACCACCACCAAAGGATAATGGAGCAGCTAGTGTTTCAAGTGGAATTAGCCTTTTGATGGGGTCTTTCTTTGTTGCAATCCTTTTGAGTTTCATGGGCTAG 588 0.4592 MARAMVASFMVLLLAFPTVFGTDYTVGDSSGWTQGVDYGTWASGKTFKVGDNLVFPYGPSHQVDQVDENGYKSCSSSNVLKNYNDGNSKIALSKTGKMYFICPTSGHCGSGMKLEINVVAASTTPSGSPPKSPSGTPPTTPSGTPPTTPSSPSGTTSNTTSSPPPPKDNGAASVSSGISLLMGSFFVAILLSFMG* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00561 195 Pfam Plastocyanin-like domain 32 112 IPR003245 GO:0009055
Rops4g00561 195 MobiDBLite consensus disorder prediction 122 174 - -
Rops4g00561 195 PANTHER BLUE COPPER PROTEIN 21 138 IPR039391 GO:0009055
Rops4g00561 195 FunFam Blue copper 20 124 - -
Rops4g00561 195 SUPERFAMILY Cupredoxins 21 119 IPR008972 -
Rops4g00561 195 ProSiteProfiles Phytocyanin domain profile. 22 120 IPR003245 GO:0009055
Rops4g00561 195 CDD Phytocyanin 22 118 - -
Rops4g00561 195 MobiDBLite consensus disorder prediction 149 174 - -
Rops4g00561 195 Gene3D - 22 130 IPR008972 -
Rops4g00561 195 MobiDBLite consensus disorder prediction 130 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00561 Rops-Chr4 15424363 15425770 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g00561 17 121 Miscellaneous Gene Families AT3G60280 53.333 9.82e-37 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00561 - - gmx:100803164 215.312
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g00561 4 15424363 15425770 Rops4g00561 4 15424363 15425770 ECH