Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00546 ATGGCTTCAACAAAGGGTCGAGTTAGTAGTTTTTCTCGCAATGTGTCAAGTGTAACATCTCAGAATCCAGGGCTTAAGCATGGCCCAAATGGGACAATGTTCATATCATCTGGGATTCCTGATCTTGACAAGATTTTAGGTGGTGGTTTTTCTCTGGGTAGCCTTGTGATGATTATGGAAGATGCAGAAGCACCTCATCATATGCTTCTATTGAGAAATTTTATGTCTCAAGGACTTGTACACAAACAGCCACTCTTGTATGCTAGTGCAGCATCTAGAGACCCTAAAGGATTTCTTGGTACTTTGCCTGGTCTAGGGTCTTCCAAAGAGGATAAATCTCGGGATCTCGGCCATGAAAAGGATCTGAGAATTGCTTGGCAGTACAAGAAGTACTTTGGTGAGCCTCAGCTAAATATCAACTCTAATAATGGTGGTCAGCATGATTACTGCAATAATTTTGACTTGCGGAAGCCCCTGGACAGGCAATTTTTTAGTGGCATGAATGTAGATTGTGTTAGCATCCAAGATTCTCCAAACCTTGCTGCTCTTCAAGATCGTTGTACTGGATTTCTAGCTCAATTCTCAAGAAATGAAGGCAGCATTTCCTCTGCTGGTCGTATTGCAATTCAGTCATTCTGTTCTCCACAATGCAGATATGCAAACATGGAGTGGCATATGCTTTCCTTTATTAGGTTCCTAAAAGGCATGGCCCGGTCATCCAATGCTGTTGTTGTTGTAACATTTCCACCTTCACTTCTTTCTCCATCTTGTTCAAAAAGATTGCAGCATATGGCAGACACCTTGCTTTCTGTCCGAGCCCTTCCAGATGAAGACAAGGAACTGGCGAAACTCCTTACTGGTTACCAGGACATGGTTGGGCTTTTAAGTGTACATAAAGTTGCACGGTTAAATACACAGGTTCCTGTGATTCTTGATGCCACAACATTCTCTATAAAATTGCAAAAACGGAGGTTTTTGGTTTTAGAATGTCTAAATCAAGCCCCAGTTGACGGTTCAAGTGGGAGTTCATATGGCACATCTGGTAGCTGTTCTGGGTCAACTAAAACTGGATCACTTGATTTTTAG 1086 0.4217 MASTKGRVSSFSRNVSSVTSQNPGLKHGPNGTMFISSGIPDLDKILGGGFSLGSLVMIMEDAEAPHHMLLLRNFMSQGLVHKQPLLYASAASRDPKGFLGTLPGLGSSKEDKSRDLGHEKDLRIAWQYKKYFGEPQLNINSNNGGQHDYCNNFDLRKPLDRQFFSGMNVDCVSIQDSPNLAALQDRCTGFLAQFSRNEGSISSAGRIAIQSFCSPQCRYANMEWHMLSFIRFLKGMARSSNAVVVVTFPPSLLSPSCSKRLQHMADTLLSVRALPDEDKELAKLLTGYQDMVGLLSVHKVARLNTQVPVILDATTFSIKLQKRRFLVLECLNQAPVDGSSGSSYGTSGSCSGSTKTGSLDF* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00546 361 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 277 IPR027417 -
Rops4g00546 361 MobiDBLite consensus disorder prediction 1 31 - -
Rops4g00546 361 Gene3D - 17 337 IPR027417 -
Rops4g00546 361 Pfam PAXNEB protein 19 361 IPR008728 GO:0002098|GO:0033588
Rops4g00546 361 MobiDBLite consensus disorder prediction 338 361 - -
Rops4g00546 361 MobiDBLite consensus disorder prediction 1 27 - -
Rops4g00546 361 CDD Elp4 30 274 - -
Rops4g00546 361 PANTHER PAX6 NEIGHBOR PROTEIN PAXNEB 9 361 IPR008728 GO:0002098|GO:0033588
Rops4g00546 361 FunFam Elongator complex protein 4 17 337 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00546 K11375 - gmx:100799237 614.764