Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00543 ATGGCTTCTTCTTCCAATTCCAAATCTTCGTCGTTTCTGCAACGTTACGGTTACGATTTGCTGTTAGCATCAATCGCTTCTTTCTACGTTCTCATGGTTCCATACACTAAGGTCGAAGAAAGTTTCAACGTTCAGGCAATGCATGATATTCTTTATCACCGGTTTCACTTAGACAATTATGATCATCTGGAATTCGCTGGAGTGGTTCCTCGCACTTTCATTGGTGCTTTGCTTGTTTCACTTGTTGCGGCTCCATTTGCATTAACTGCAAGCTTGCTGCATTTGCCGAAGTTTTACACTCTTATCATAGTTCGGATTGTCCTAGGGTGCATCATACTATATACTCTAAGATTCTTTCGTCATCAGATAAGGAATAAATTTGGGCACCAAGTAGAAGCCTTCTTTGTGATACTAACTTCCATTCAGTTTCATTTTCTGTTCTATTGTACCCGTCCGCTTCCTAACATTCTTGCTTTGGGTATAGTGAATTTGGCATATGGATACTGGTTTGAGGGGCGCTTTTATGCAGCTCTAAACTCTCTGATTTTTGCTACAACTGTGTTCAGATGTGACATGCTGTTACTTCTTGGTCCCCTTGGGCTACAACTTCTTCTGACAAAAAAAATCTCAGTATGGGGTGCTTTAAAACATTGCATTGGGATGGCCTTCTTCTGCATAGGTCTAACCACACTGGTTGATTCAATTATGTGGAAAAGGTTATTGTGGCCTGAGTTTGAAGTGTTCTGGTTTAATTCTGTACTAAACAAGAGTTCTGAATGGGGAACACATGCTTTCCATTGGTACTTCACCTCAGCACTCCCTCGTTCACTGCTTGCTGCATATCCTCTTTCACTGTTTGGTCTCTTTGTAGACAGAAGGGTTTGGTCTTTCACCTTCCCAGTTCTTGCCTTCATTTTGCTTTATTCTAAGCTTCCCCACAAGGAGCTTCGTTTCATTATAAGTTCAGTTCCAATATTTAACTTGTCTGCTTCGATTGCATGCAACAGAATTTACAACAATAAGAAAAAGATGATTTGGAACTTGCTTTTCCTCATTATGTTGGGATTACTTCTAATGAGTCTTGGAGGCACCATCACAACTTTCATGGCATCATACTGGAACTATCCTAGTGGTCATGCCTTAAAAAAATTGCATGGGATTGGTTTTCTTAATGATACAGATGAACAATGGGTTCACATTGATACATTTTCAGCCATGAATGGGATATCGCGCTTTTGTGAAAGTGATTTCCCATGGAGGTATTCTAAAGAAGAAGAAATCAGCTTGCAAGAATTTGGGCAGAGAAATTTTACTTTTCTTCTGAATGAACATCCTGTGATCAATGGATTCAAGTGTCTATTTACTGAAGATGGGTTCTCAAAAGTCCGCTTTAAATTTGGCTTTCCGCCAATTTTACTGGATAAAGAGCCCAAAGTGTATGTCCATGGAAATTTAGAAAACAAGGATCTTCTCAACAAAAATTGGCCTGGCTGCCCATAA 1500 0.3973 MASSSNSKSSSFLQRYGYDLLLASIASFYVLMVPYTKVEESFNVQAMHDILYHRFHLDNYDHLEFAGVVPRTFIGALLVSLVAAPFALTASLLHLPKFYTLIIVRIVLGCIILYTLRFFRHQIRNKFGHQVEAFFVILTSIQFHFLFYCTRPLPNILALGIVNLAYGYWFEGRFYAALNSLIFATTVFRCDMLLLLGPLGLQLLLTKKISVWGALKHCIGMAFFCIGLTTLVDSIMWKRLLWPEFEVFWFNSVLNKSSEWGTHAFHWYFTSALPRSLLAAYPLSLFGLFVDRRVWSFTFPVLAFILLYSKLPHKELRFIISSVPIFNLSASIACNRIYNNKKKMIWNLLFLIMLGLLLMSLGGTITTFMASYWNYPSGHALKKLHGIGFLNDTDEQWVHIDTFSAMNGISRFCESDFPWRYSKEEEISLQEFGQRNFTFLLNEHPVINGFKCLFTEDGFSKVRFKFGFPPILLDKEPKVYVHGNLENKDLLNKNWPGCP* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00543 499 Pfam Alg9-like mannosyltransferase family 28 361 IPR005599 GO:0016757
Rops4g00543 499 PANTHER GLYCOSYLTRANSFERASE 18 470 IPR005599 GO:0016757
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g00543 219 325 Glycosyltransferase AT5G14850 28.972 3.05e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00543 K03847 - gmx:100776070 890.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g00543 4 14954577 14971723 Rops4g00543 4 14954577 14971723 ECH