Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00529 ATGTATGGAGGAGATGAAGTATCAGCAATAGTAATTGACTTGGGTTCACACACTTGTAAAGCTGGTTATGCCGGTGAAGATGCCCCCAAGGCTGTGTTTCCTTCTGTTGTTGGGGCAATTGATCAAATGGATGTTGATGAATCGGATAATGCCGAAAAGAACTCTGCCTCTGCTGGGGAGTCAAAGAATAATCTTTCTGACAAAGCCAAGGCAAAGAGGAAACTGTACGTAGGATCTCAGTCCTTGGGATACCGCAGAGATTATATGGAGGTGCTGTCTCCATTAAAGGATGGAATTGTTGCTGACTGGGATATTGTTGACAGCATATGGGATCATGCCTTCAGGGAGTGCCTATTGATTGACCCTAAAGAGCATCCCATGCTCCTTGCGGAGCCTTCTTCTAACGCACAACAGCAGAGAGAAAGGACAGCAGAGCTTATGTTTGAGAAGTACAAAGCACCTGCATTATTTTTGGCGAAGAATGCTGTTCTAACTTCTTTTGCATCGGGGCGTGCAACGTCATTAGTTGTTGATAGTGGTGGAGGATCAACTACAATTGCACCAGTACATGATGGCTATGTTCTTCAAAAGGCTGTGGCAACCTCTCCAATTGGAGGAGAAATTCTTACAGACTGCTTGATGAAAAGCTTGGAAAGCAAGGGTATTGTGATAAAACCACGGTATTCCTTTAGGAGAAAGGAAATACGCCCTGGAGAGTTTCAGACTGTAGATCTTGATTTTCCGAATACAACTGAAAGCTACAAACTCTACTCCCAGAGGGTGATTGCTAGTGATATCAAGGAATGTGTGTGCCGTGCTCCAGATACTCCATATGATGAAAATGCATATTCAAACATCCCAATGACCCCATATGAGCTTCCTGATGGCCAGACAATTGAAATTGGAGCTGACAGATTTAAGATCCCAGATGTTCTTTTTAATCCATCCCTGGTTCAGTCAATTCCTGGCATGGAGAGCTTTGCAGAAATTGCTCCTTCAGTTCGTGGCCTGCCTCAAATGGTTATAGAAAGCATTAATAAGTGTGATGTAGACATTCGAAGAGAATTATTTAGTAGCATACTGCTTGCTGGTGGCACAGCTTCAATGCAACAACTGAAGGAACGCCTTGAGAAAGACTTGCTAGAGGAATCCCCTCAAGCTGCCAGAGTAAAAGTATTGGCCAGTGGAAATGCTACTGAAAGAAGGTTTAGTGTTTGGATAGGGGGTAGTATATTGGCTTCTCTAGGCTCTTTCCAGCAAATGTGGTTCTCCAGAGCCGAGTATGAAGAGCATGGAGCTTCATATATCCAAAGGAAGTGTCCTTGA 1326 0.4382 MYGGDEVSAIVIDLGSHTCKAGYAGEDAPKAVFPSVVGAIDQMDVDESDNAEKNSASAGESKNNLSDKAKAKRKLYVGSQSLGYRRDYMEVLSPLKDGIVADWDIVDSIWDHAFRECLLIDPKEHPMLLAEPSSNAQQQRERTAELMFEKYKAPALFLAKNAVLTSFASGRATSLVVDSGGGSTTIAPVHDGYVLQKAVATSPIGGEILTDCLMKSLESKGIVIKPRYSFRRKEIRPGEFQTVDLDFPNTTESYKLYSQRVIASDIKECVCRAPDTPYDENAYSNIPMTPYELPDGQTIEIGADRFKIPDVLFNPSLVQSIPGMESFAEIAPSVRGLPQMVIESINKCDVDIRRELFSSILLAGGTASMQQLKERLEKDLLEESPQAARVKVLASGNATERRFSVWIGGSILASLGSFQQMWFSRAEYEEHGASYIQRKCP* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00529 441 Gene3D - 180 380 - -
Rops4g00529 441 FunFam actin-related protein 4 383 441 - -
Rops4g00529 441 SMART actin_3 7 441 IPR004000 -
Rops4g00529 441 SUPERFAMILY Actin-like ATPase domain 5 177 IPR043129 -
Rops4g00529 441 MobiDBLite consensus disorder prediction 45 66 - -
Rops4g00529 441 Pfam Actin 4 440 IPR004000 -
Rops4g00529 441 Gene3D Actin; Chain A, domain 4 206 319 - -
Rops4g00529 441 Gene3D - 1 179 - -
Rops4g00529 441 Gene3D - 386 441 - -
Rops4g00529 441 PANTHER ACTIN 9 434 IPR004000 -
Rops4g00529 441 CDD NBD_sugar-kinase_HSP70_actin 10 208 - -
Rops4g00529 441 SUPERFAMILY Actin-like ATPase domain 170 440 IPR043129 -
Rops4g00529 441 FunFam Actin-related protein 4 1 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00529 Rops-Chr4 14725941 14736307 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g00529 1 440 Miscellaneous Gene Families AT3G53750 37.698 1.08e-95 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00529 K11340 - gmx:100785066 822.002