Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00468 ATGAACCACCCCTCTTTCCTTTTTCTCACTCTCACAATTCTCTTTTGTTCTTCTTTCCATTCTTTTGTTGATGCTAACCATCTCATCCAACAAACCTGCAAGAATTGCTCAAAAAATGATCCCAACATAAGCTACAAATTTTGCATAAAATCTCTTGAATCAGACCACAGAAGCCAATATGCCAAAAACCTCCATGAACTAGGCCTCATATCTATCAAGCTAACAAGGCACAATGTGACAAAGACTAGTGCTCACATCAAAGAGATTTTGAAGAATAAGAAGAATAATTTAGACCCCTTTATCAAAGAATGCTTAAATGATTGTCTTCAAGGTTATTCTGATGCCATCACAACTCTTAGAGAAGCCATTAGAGATTTCGAGGCCAAGCGTTACAAAGATTCTAATATCAAGCTTAGCTCAGTAATTGATGCCTCTACCTCATGTGAAGATGGATTCAAGCAAAAGAATGATGTCATTTCACCATTGACAAAAAGAAACAAGGATATTTTTCAGCTTTCAGCTATAGCACTTTCGATTATTAACTTGCTCAATGTTGATAAATTAAAGGGAACTACCAAATTCGACATCGAGAAGTTCATCGGAGAGAACGACCTTTGGATGATCAAAATGAAGGCCCTTCTCATTCAAAATGGATTGCTTGATGTTTTAGCGAGAGAGAAAGGTATATCTAATTCAACTTCTTATGTGAAAATTGAGGAGGTCCGAAAGGACACCTTAGAGAAGGCACATAGTGCCATAATCTTGTCACTAGGAGACAAGGTTCTTAGAGAAGTGGCAAATAAGACCACTGCGGCGGGTGTATCGTAA 828 0.3768 MNHPSFLFLTLTILFCSSFHSFVDANHLIQQTCKNCSKNDPNISYKFCIKSLESDHRSQYAKNLHELGLISIKLTRHNVTKTSAHIKEILKNKKNNLDPFIKECLNDCLQGYSDAITTLREAIRDFEAKRYKDSNIKLSSVIDASTSCEDGFKQKNDVISPLTKRNKDIFQLSAIALSIINLLNVDKLKGTTKFDIEKFIGENDLWMIKMKALLIQNGLLDVLAREKGISNSTSYVKIEEVRKDTLEKAHSAIILSLGDKVLREVANKTTAAGVS* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00468 275 Coils Coil 109 129 - -
Rops4g00468 275 FunFam Putative invertase inhibitor 24 183 - -
Rops4g00468 275 Pfam Plant invertase/pectin methylesterase inhibitor 28 179 IPR006501 GO:0004857
Rops4g00468 275 CDD PMEI-Pla_a_1_like 33 182 IPR034088 -
Rops4g00468 275 SMART PMEI_2 24 179 IPR006501 GO:0004857
Rops4g00468 275 PANTHER OS02G0537100 PROTEIN 8 183 - -
Rops4g00468 275 Gene3D Invertase/pectin methylesterase inhibitor family protein 24 183 IPR035513 -
Rops4g00468 275 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 26 183 IPR035513 -
Rops4g00468 275 NCBIfam pectinesterase inhibitor domain 5 183 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00468 Rops-Chr4 13552646 13556560 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00468 - - gmx:100306248 266.159