Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00463 ATGTGTACTAAAACACTGGGAACAGCTGGTGTTGCAATTGCTGGACTTCTAGGTGCTGTAAGAGCGCAAGGAAGGCCAATGATTGACTTCCCAAAGCAGAAGATTGTTGTTGCTGGTGCTGGAAGTGCTGGAATTGGCGTTCTTAATGCAGTGAGAAAAACAATGGCAAGGATGTTGGGTAATAATGAAGTAGCTTTTGAGAGTGCAAAAAGTCAATTTTGGGTTGTTGATGCTAAGGGATTAATCACAGAAGGACGTGAAAATATTGATCCAGATGCCCGCCCTTTTGCAAGAAATTTGAAAGAAATGGGTCGCCAAGGACTGAAGGAAGGAGCAAGCTTAGTGGAAGTGGTCAAACAAGTGAAGCCTGATGTCCTCCTAGGACTATCTGCTGTTGGTGGATTGTTCTCAAAAGAGGTATTAGAGGCTCTCAAGGATTCAACATCAACGAGACCAGCCATATTTGCCATGTCAAATCCAACAAAGAATGCTGAATGCACCCCTGAAGAAGCATTCTCCATTTTAGGCGACAATGTCATATTTGCAAGTGGAAGTCCATTCAGTGACGTGGATCTCGGAAATGGTCGGATTGGCCACTGCAACCAGGGGAACAATATGTATCTCTTTCCGGGCATTGGTCTTGGAACTCTTTTGTCTGGCTCTAGGATCATATCTGATGGCATGCTACAGGCTGCTGCTGAGCGTCTGGCTGCATATATGAGTGAAGAGGAGGTCCTCAAAGGGATCATTTTCCCTTCAACATCCAGAATTCGAGATATCACAAAGGAGGTAGCTGCAGCTGTAATAAAAGAAGCTGTGGAGGAGGATCTAGCTGAAGGACATCATGAAATGGATGCTCGAGAGCTGCGCAAACTTAGTCAGGATGAAATCGTGGAATATGTGAAGAATAACATGTGGAGTCCAGAGTACCCAACACTAGTTTACAAGCAAGATTGA 957 0.4462 MCTKTLGTAGVAIAGLLGAVRAQGRPMIDFPKQKIVVAGAGSAGIGVLNAVRKTMARMLGNNEVAFESAKSQFWVVDAKGLITEGRENIDPDARPFARNLKEMGRQGLKEGASLVEVVKQVKPDVLLGLSAVGGLFSKEVLEALKDSTSTRPAIFAMSNPTKNAECTPEEAFSILGDNVIFASGSPFSDVDLGNGRIGHCNQGNNMYLFPGIGLGTLLSGSRIISDGMLQAAAERLAAYMSEEEVLKGIIFPSTSRIRDITKEVAAAVIKEAVEEDLAEGHHEMDARELRKLSQDEIVEYVKNNMWSPEYPTLVYKQD* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00463 318 PRINTS Malic enzyme signature 35 51 IPR001891 GO:0004470|GO:0004471
Rops4g00463 318 PRINTS Malic enzyme signature 1 17 IPR001891 GO:0004470|GO:0004471
Rops4g00463 318 PRINTS Malic enzyme signature 149 165 IPR001891 GO:0004470|GO:0004471
Rops4g00463 318 PANTHER MALIC ENZYME-RELATED 7 310 - -
Rops4g00463 318 SMART Malic_M_2 7 273 IPR012302 GO:0051287
Rops4g00463 318 FunFam Malic enzyme 4 317 - -
Rops4g00463 318 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 315 IPR036291 -
Rops4g00463 318 Gene3D - 5 318 - -
Rops4g00463 318 Pfam Malic enzyme, NAD binding domain 7 273 IPR012302 GO:0051287
Rops4g00463 318 PIRSF ME 5 316 IPR001891 GO:0004470|GO:0004471
Rops4g00463 318 CDD NAD_bind_1_malic_enz 7 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00463 Rops-Chr4 13434663 13448626 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00463 K00028 - gmx:100799344 548.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g00463 4 13434663 13448626 Rops4g00463 4 13434663 13448626 ECH