Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00445 ATGTTTGGATATGTCACTTACATTGATTTCATGAACAATATGGGTCACTGTAACTTTGAGACCGTTCCAAAGTGGCTCTTCAATATCTTCCCCACTCTCAAGTATCTCATGTACACCCCATCGTTTCACTCTTTGCACCACACCCAGTTTAGGACCAACTACTCCCTCTTTATGCCATTTTATGACTACATTTATGGCACCATGGACAAGGCTTCAGATGAGTTGTATGAGTCATCATTAAAACGAAAGGATGAAACCCCAGATGTTGTGCATCTGACACATCTCACAACGCCTGAATCCATCTACCATCTGAGACTTGGATTTGCATACTTGGCCTCCAAACCTTACACGTCAAAATGGTACCTTTGGTTGGTGTGGCCTGTGACTACTTGGTCCATAATGCTCACTTGGGTCTATGGTCGTACATTCGTTGTGGAGAGTAACCGTTTTGACAAACTCAAATTGCATACTTGGGCATTATCCAAGTACAGTGTTCAAATACCTATCAATAGAATGATTGAGGAAGCAATACTTGATGCTGAGAGAAAAGGCACAAAAGTGCTGAGCCTAGGCCTCATGAATCAAGAGGAGGAGCTTAACTTCTATGGAGGGCTATACATTAGGAGGCACCCAAAACTAAAAGTTAAGGTTGTGGATGGTAGCAGCCTTGCTGTTGCTGTTGTTCTTAATAGCATTCCTAAAGGAACAACTCAAGTATTACTTAGAGGCAAACTCACCAAGGTTGCTTATGCAGTTGCCTTCACATTGTGCCAACAAGGCACTCAGGTTGTTCTAATGCATGAGGATGATTATGTGAAGCTCCAAAAATCGTTTAATACCTCTGAAACTAATTTGGTCATTGCCAGAAGTTACACTCAGATGACTTGGTTAGTGGGAGATGGATTGACTAAAGAAGAACAATTGAAGGCACCCAAAGGAACATTATTTATTCCATACTCACAATTTCCACCAAAGAAATATCGCCAGGATTGCTCCTATCATTGCACCCCATCAATGCTAACTCCCAATTCTATTGAAAATGTCCATTCTTGTGAGGATTGGTTGCCAAGGAGGGTAATGAGTGCATGGCGCATAGCTGGGATTGTGCACACTTTAGAAGGATGGTCTGAACATGAATGTGGCTATACAATGCATGACATAGACAAAGTTTGGAATTCAACTCTTCAACATGGGTTCCAACCTATCACTGTGCCAGTCAAAGAAATAGCTCACTACTAA 1239 0.4173 MFGYVTYIDFMNNMGHCNFETVPKWLFNIFPTLKYLMYTPSFHSLHHTQFRTNYSLFMPFYDYIYGTMDKASDELYESSLKRKDETPDVVHLTHLTTPESIYHLRLGFAYLASKPYTSKWYLWLVWPVTTWSIMLTWVYGRTFVVESNRFDKLKLHTWALSKYSVQIPINRMIEEAILDAERKGTKVLSLGLMNQEEELNFYGGLYIRRHPKLKVKVVDGSSLAVAVVLNSIPKGTTQVLLRGKLTKVAYAVAFTLCQQGTQVVLMHEDDYVKLQKSFNTSETNLVIARSYTQMTWLVGDGLTKEEQLKAPKGTLFIPYSQFPPKKYRQDCSYHCTPSMLTPNSIENVHSCEDWLPRRVMSAWRIAGIVHTLEGWSEHECGYTMHDIDKVWNSTLQHGFQPITVPVKEIAHY* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00445 412 PANTHER STEROL DESATURASE 2 401 - -
Rops4g00445 412 Pfam WAX2 C-terminal domain 239 401 IPR021940 -
Rops4g00445 412 Pfam Fatty acid hydroxylase 4 67 IPR006694 GO:0005506|GO:0008610|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00445 Rops-Chr4 13197370 13201134 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g00445 1 402 Lipid Metabolism Gene Families AT1G02190 55.904 9.51e-165 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00445 K15404 - gmx:100818020 716.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g00445 4 13197370 13201134 Rops4g00445 4 13197370 13201134 ECH