Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00443 ATGGCTTCAAGGCCAGGAATCCTCACTGATTGGCCATGGAAGCCACTTGGAAGCTTTAAGTATGTGATACTAGCTCCTTGGGCCATTCACAGCACGTATTCTATGTTTGTGAAAGATGAAAGTCAAAGGGACATATTCAAATTTCTTATATTACCATTTTTGATTTGGCGTATGCTTCACAACCAGATATGGATCACTCTCTCTCGTTATCGAACAGCCAAAGGCAATAACAAAATTGTCGACAAGGGAATTGAATTTGATCAAGTTGATAGAGAAAGAAATTGGGATGACCAAATATTGTTCACTGGGTTATTGTACTACTTGGGAAGCTATATTTTGCCTGGTGGGTCACATATTCCACTTTGGAGAATTGATGGAGTGATTATAACAATATTGCTTCATGCGGGACCAGTGGAGTTTCTATACTATTGGTTACACAGAGCACTTCATCACCACTTCCTCTACTCTAGATACCATTCTCACCACCATTCTTCCATTGCCACTGAACCCATAAGTTCTGTGATCCATCCATTCGCTGAACACATGACATATTTCCTTCTCTTCGCAATACCCAAGTTGACCCTTGTCTTCACATACACAGCCTCTGTGGTGGCCATGTTTGGATATGTGACTTACATTGATTTTATGAACAATTTGGGTCACTGCAACTTTGAGATCGTTCCAAAGTGGCTCTTTAATATCTTCCCTCCTCTCAAGTATCTCATGTACACCCCATCGTTTCACTCTTTGCACCATACTCAGTTTAGGACAAACTACTCCCTTTTCATGCCATTATATGACTACATCTATGGCACCATGGACAAGGCTTCACATGAGTTGCATGAATCAGCATTAAAAAGAAAGGAAGAAACCCCAGATGTTGTACACCTAACACATCTCACCACGTTTGAATCCATCTATCATCTGAGGCTTGGATTTGCATACTTGGCTTCCAAGCCTTACACGTCAAAATGGTACCTTTGGTTGATGTGGCCTGTTACTGCATGGTCCATGATGCTCACTTGGATCTATGGTCGTACATTCGTTGTGGATAGTAACCGCCTTGACAAACTCAAGCTACAAAGTTGGGCCATACCCAAATACAGTGTCCAATACTTTCTAAGACAACAAAAAGTGCCTATCAATAGAATGATTGAGGAAGCAATACTTGATGCTGAGAAAAAAGGCATAAAAGTGCTGAGCCTAGGCCTCATGAATCAAGGGGAGGAACTTAACATCTATGGAGGGCTATATGTTAGTAAGCATCCAAAACTGAAAGTTAAGGTTGTAGATGGTAGCAGCCTTGCAGTTGCTGTTGTTCTTAACAGCATTCCTAAAGGAACAACTCAAGTATTACTTAGAGGCAAACTGACCAAGGTTGCTTATGCTATTGCCTTCACTTTGTGCCAACAAGGCATTAAGGTTGCTACAATTCATGAGGATGACTATATGAAGCTCACAGAATCGTTGGGTAGCGCTGAAATTATTTTGGTCATTTCTAAAAGTTACACTCAAACGACATGGTTAGTGGGAGATGGACTGACTGAAGAGGAACAGTTAAAGGCACCCAAAGGAACATTATTTATTCCATATTCGCAATTCCCACCAAAGAAATACCGTAAGGATTGCTCCTACCATTGTACCCCAGCAATGCTAATTCCCAATTCTATTGAAAATATCCATTCTTGTGAGGATTGGTTGCCAAGGAGGGTAATGAGTGCATGGCGCATAGCTGGGATTGTGCATACTTTAGGAGGATGGAATGAACATGAGTGTGGCTATACAATGCATAACATAGACAAAGTTTGGGAATCAACTCTTCAACATGGGTTCAAACCTCTTTCTGTTCCTGTCAAAGAAATAGCTCATTACTGA 1875 0.4101 MASRPGILTDWPWKPLGSFKYVILAPWAIHSTYSMFVKDESQRDIFKFLILPFLIWRMLHNQIWITLSRYRTAKGNNKIVDKGIEFDQVDRERNWDDQILFTGLLYYLGSYILPGGSHIPLWRIDGVIITILLHAGPVEFLYYWLHRALHHHFLYSRYHSHHHSSIATEPISSVIHPFAEHMTYFLLFAIPKLTLVFTYTASVVAMFGYVTYIDFMNNLGHCNFEIVPKWLFNIFPPLKYLMYTPSFHSLHHTQFRTNYSLFMPLYDYIYGTMDKASHELHESALKRKEETPDVVHLTHLTTFESIYHLRLGFAYLASKPYTSKWYLWLMWPVTAWSMMLTWIYGRTFVVDSNRLDKLKLQSWAIPKYSVQYFLRQQKVPINRMIEEAILDAEKKGIKVLSLGLMNQGEELNIYGGLYVSKHPKLKVKVVDGSSLAVAVVLNSIPKGTTQVLLRGKLTKVAYAIAFTLCQQGIKVATIHEDDYMKLTESLGSAEIILVISKSYTQTTWLVGDGLTEEEQLKAPKGTLFIPYSQFPPKKYRKDCSYHCTPAMLIPNSIENIHSCEDWLPRRVMSAWRIAGIVHTLGGWNEHECGYTMHNIDKVWESTLQHGFKPLSVPVKEIAHY* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00443 624 PANTHER STEROL DESATURASE 13 613 - -
Rops4g00443 624 Pfam Fatty acid hydroxylase 137 272 IPR006694 GO:0005506|GO:0008610|GO:0016491
Rops4g00443 624 Pfam WAX2 C-terminal domain 451 613 IPR021940 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00443 Rops-Chr4 13118113 13125134 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g00443 1 614 Lipid Metabolism Gene Families AT1G02190 58.682 0.0 739
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00443 K15404 - gmx:100818020 1093.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g00443 4 13118113 13125134 Rops4g00443 4 13118113 13125134 ECH