Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00421 ATGGCTTCTTGTTTGCGTTTGTTGAAACTACAGACACTGAACCACAAGAACAGCTATGTTAATGTTGTTGCTCTTTATTCTTCGCCACTAATGTTACGACTTTCACCTTTTCTTACCATTCCCTCTCTCACCCCTTCTCTTTCTTTCTCTTTAAACTGCCACCTTTCTTCTTCTTCTTCTTCGCAAGTAGCACTACAAGACCAACAACAACAAGAGCCCCAAGTTCGAAGCTCACAGCTTGTTGCATTGGAATATGCAGACCTTAACCTCTCTTACAACTTGGATCTGGGTCATGTCAGGATCAGGCAACATGTCAATCCTCTCAGCTCTTCCTTCTCTGTTCCTGCACAAGTACCAGACTGGAACCAGGTCTTTGCAGACCCAACATTGCCACTCATGGTGGATATTGGATGTGGCAGTGGCAGGTTTCTTATGTGGCTTGCCAAAAAAACTCCTAATGTGAGAAATTATTTGGGATTGGAGATACGGCCAAGGATAGTCAAGCGTGCTGGGATATGGGTAAAAGATCTGGCTCTTGATAACATACATATCATGTTTGCAAATGCCACAATTTCTTTTAAGCAGTTAGTAGAATCATATCCTGGGCCCTTGCAGTTAGTTTCAATTTTGTGTCCAGACCCACATTTCAAGAAGAAACATCATAAAAGAAGAGTTCTGCAGAAGCCTTTAGTTGACGCTATTGTACATAATTTAATGCCTGGAGGACAGGTGTTCATACAATCTGATGTGCTTGAAGTGGCACTTGACATGAGAAATCAGTTTGATGTAATTGATGCACTCAAACACACAGATGCTTTTAAACCTTCTATGTTGTGTGATAGTGAAGGATGGTTGTTAAGCAACCCCATGGGGATAAGGACAGAGAGAGAGATTCATGCAGAATTTGAAGGTGCAAAAATCTATAGAAGGTTGTACCAGAAGTTGATGTGA 951 0.4154 MASCLRLLKLQTLNHKNSYVNVVALYSSPLMLRLSPFLTIPSLTPSLSFSLNCHLSSSSSSQVALQDQQQQEPQVRSSQLVALEYADLNLSYNLDLGHVRIRQHVNPLSSSFSVPAQVPDWNQVFADPTLPLMVDIGCGSGRFLMWLAKKTPNVRNYLGLEIRPRIVKRAGIWVKDLALDNIHIMFANATISFKQLVESYPGPLQLVSILCPDPHFKKKHHKRRVLQKPLVDAIVHNLMPGGQVFIQSDVLEVALDMRNQFDVIDALKHTDAFKPSMLCDSEGWLLSNPMGIRTEREIHAEFEGAKIYRRLYQKLM* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00421 316 CDD AdoMet_MTases 134 247 - -
Rops4g00421 316 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 131 271 IPR029063 -
Rops4g00421 316 ProSiteProfiles SAM-dependent methyltransferase TRMB-type domain profile. 89 314 IPR003358 GO:0006400|GO:0008176
Rops4g00421 316 Pfam Putative methyltransferase 131 308 IPR003358 GO:0006400|GO:0008176
Rops4g00421 316 NCBIfam tRNA (guanosine(46)-N7)-methyltransferase TrmB 117 310 IPR003358 GO:0006400|GO:0008176
Rops4g00421 316 PANTHER 3-DEOXY-D-MANNO-OCTULOSONIC-ACID TRANSFERASE/TRNA GUANINE-N 7 - -METHYLTRANSFERASE 73 314 IPR003358 GO:0006400|GO:0008176
Rops4g00421 316 Gene3D Vaccinia Virus protein VP39 101 315 IPR029063 -
Rops4g00421 316 FunFam tRNA (Guanine-N(7)-)-methyltransferase 100 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00421 Rops-Chr4 12517043 12523628 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00421 K03439 - gmx:100788255 442.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g00421 4 12517043 12523628 Rops4g00421 4 12517043 12523628 ECH