Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00419 ATGGATCCTCAGGCCTTCATTAGGTTGTCAATAGGTTCTCTGGGGTTGAGATGTAATGGAATTGAATTGAGCACTGGAAAATCTGGAATTCATAGACTCTCTTCATCCTATGTCTGTGAGATACGACTTCGAGGTTTTCCTGTCCAAACATCATCAGTCCCCTTGATAACCTCTGCAGAAGCTATACCTGATACTCAGAACATTGCTTCAAGCTTTTACCTTGAGGAATCTGACTTAAAAGCATTGTTGGCACCTGGTTGTTTCTACAATCCTCATGCTTGTTTGGAGATTGCTGTATTTTCAGGGAGGAAGGGATCCCATTGTGGAGTTGGCATCAAAAGGCAGCAAATTGGGATTTTCAAAATGCAGGTTGGCCCTGAATGGGGTGAAGGAAAGCCATTGATTCTTTTCAATGGTTGGATAGGTATGGGCAAGAACAAACAGGAGAATGGAAAGCCAGGTGCAGAGCTACATTTAAAAGTGAAACTAGATCCTGACCCTAGATATGTATTCAAGTTTGAAGATATAGCAACATTGAGTCCTCAGATATTTCAGCTGCAAGGATCCATCAAGCAGCCAATCTTCAGTTGCAAGTTTAGTAAGGACAGGGTTTCCCAGATTGACCCGTTGAGCACTTACTGGACAGATTCTACTGACATCTCTGATTTAGAGACTGAAAGGAGAGAGAGGAAGGGGTGGAAGGTGAAGATCCATGATCTATCTGGCTCAGCTGTAGCTGCAGCCTTCATAACAACTCCCTTTGTTCCATCTTCAGGTTGTGATTGGGTTGCCAGATCCAACCCAGGAGCTTGGTTGATTGTTCGTCCTGATGTTTGTGGATCCGAAAGCTGGCAGCCATGGGGAAAGCTCGAAGCATGGCGCGAGCGTGGCATTAGAGACTCAGTATGCTGCAGATTCCATCTTCTATCTGAAGCTCAAGAAGGAGGTGAACTTCTTATGTCTGAAATACATATAAATGCTGAAAAGGGTGGGGAGTTTTTCATAGACACTGAAAAACACATGAGAACTATAAATGCTGCAGCAAGTCCAATTCCTAGTCCACAAAGTAGTGGAGACTTTGGTGCATTGAGTCCATTAGTTGGAGGTTTTGTCATGAGCTGCAGAATTCAAGGTGAAGGGAAGCGTAGTAAGCCATTAGTGCAACTCGCAATGCGACACGTGACATGCGTGGAGGATGCTGCCATCTTCATGGCACTTGCTGCAGCTGTTGACCTCAGTATTGAGGCATGTAGACCTTTCAGAAGGAAGATCAGAAGAGGGTTTCGGAATTCCATGTGA 1299 0.4457 MDPQAFIRLSIGSLGLRCNGIELSTGKSGIHRLSSSYVCEIRLRGFPVQTSSVPLITSAEAIPDTQNIASSFYLEESDLKALLAPGCFYNPHACLEIAVFSGRKGSHCGVGIKRQQIGIFKMQVGPEWGEGKPLILFNGWIGMGKNKQENGKPGAELHLKVKLDPDPRYVFKFEDIATLSPQIFQLQGSIKQPIFSCKFSKDRVSQIDPLSTYWTDSTDISDLETERRERKGWKVKIHDLSGSAVAAAFITTPFVPSSGCDWVARSNPGAWLIVRPDVCGSESWQPWGKLEAWRERGIRDSVCCRFHLLSEAQEGGELLMSEIHINAEKGGEFFIDTEKHMRTINAAASPIPSPQSSGDFGALSPLVGGFVMSCRIQGEGKRSKPLVQLAMRHVTCVEDAAIFMALAAAVDLSIEACRPFRRKIRRGFRNSM* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00419 432 PANTHER OS08G0163500 PROTEIN 1 429 IPR010410 -
Rops4g00419 432 Pfam Protein of unknown function (DUF1005) 1 428 IPR010410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00419 Rops-Chr4 12479354 12484480 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00419 - - gmx:100815012 782.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g00419 4 12479354 12484480 Rops4g00419 4 12479354 12484480 ECH