Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00414 ATGGCACAAGTGAGGAACAAGCAAGTGCTTCTGAGAGACTATGTGACTGGTTTTCCTGAGAAATCTGACATGAACATTGTTGAGAGTACCATAACTCTCAAGCTTCCAGAAGGTTCCAATGAGGTGTTGCTCAAGAATCTATACTTGTCTTGTGATCCATACATGCGAACATGCATGACCAAGGATAGTGCTGCAGGACTTGGTAACTACACCCCTGGCTCTCCATTGACAGGATATGGTGTGGCTCAAGTCCTGGAATCTGGACACCCGGATTATAAGAAAGGTGATTTAGTTTGGGGAATTACTAAATGGGAAGAGTATAGCTTGGTCCCTGCAGCTCAAATACCTTTTAAAATTGAGCATACTGATGTCCCACTTTCCTACTATACTGGAATTCTTGGTATGCCAGGAATGACTGCTTATGCTGGTTTCTTTGAAGTGGGCTCTCCCAAGAAAGGAGAGAATGTTTTTGTTTCAGCTGCCTCTGGTGCTGTTGGTCAACTTGTTGGTCAATTTGCTAAACTACATGGTTGTTATGTTGTTGGCAGTGCTGGAAGTAAAGAGAAGGTGGATTTGTTGACAAATAAATTAGGATATGATGAAGCTTTTAACTATAAAGAAGAGCCAGACCTCAATGCAGCTTTGAAAAGGTACTTTCCAGAAGGCATTGACATTTACTTTGAGAATGTTGGGGGCAAGACACTTGATGCTGTACTACTTAATATGAAACTCCATGGCCGCATACCTGTGTGTGGAATGGTCTCACAGTATAATCTTACTGAATTTGAAGGTGTGACAAATTTAGCAAATCTCATATTTAAGCGGATACGTATGGAAGGTTTTATTGTATTCGATTACTATCACCTTTATCCCAAATTCTTGGAGTTTCTCTTGCCTCTTATCAGAGAAGGGAAGGTTGTGTATGTGGAAGACATAGCTGAGGGCCTTGAGAATGCCCCTGCAGCCTTAGTTGGCATCTATAGTGGTCGCAATGTTGGTAAACAAGTGGTTGTGGTTGCTCGTGATTGA 1029 0.4189 MAQVRNKQVLLRDYVTGFPEKSDMNIVESTITLKLPEGSNEVLLKNLYLSCDPYMRTCMTKDSAAGLGNYTPGSPLTGYGVAQVLESGHPDYKKGDLVWGITKWEEYSLVPAAQIPFKIEHTDVPLSYYTGILGMPGMTAYAGFFEVGSPKKGENVFVSAASGAVGQLVGQFAKLHGCYVVGSAGSKEKVDLLTNKLGYDEAFNYKEEPDLNAALKRYFPEGIDIYFENVGGKTLDAVLLNMKLHGRIPVCGMVSQYNLTEFEGVTNLANLIFKRIRMEGFIVFDYYHLYPKFLEFLLPLIREGKVVYVEDIAEGLENAPAALVGIYSGRNVGKQVVVVARD* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00414 342 FunFam Prostaglandin reductase 2 132 308 - -
Rops4g00414 342 Gene3D - 132 308 - -
Rops4g00414 342 Pfam Zinc-binding dehydrogenase 164 297 IPR013149 -
Rops4g00414 342 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 129 305 IPR036291 -
Rops4g00414 342 SUPERFAMILY GroES-like 3 169 IPR011032 -
Rops4g00414 342 PANTHER PROSTAGLANDIN REDUCTASE 4 339 IPR045010 GO:0016628
Rops4g00414 342 Gene3D - 8 337 - -
Rops4g00414 342 Pfam N-terminal domain of oxidoreductase 7 114 IPR041694 -
Rops4g00414 342 CDD double_bond_reductase_like 4 339 - -
Rops4g00414 342 SMART PKS_ER_names_mod 42 337 IPR020843 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00414 Rops-Chr4 12332211 12335696 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00414 K19825 - gmx:100812880 600.897