Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00408 ATGGGACAAGCCTTAGACAAATTACAGGGTAAGGATTGGAGGAAAAGGCAAGTAAGGAAGATAACAGATAGTGTGTTTGACAAAATAAAGAATCAAATGCAAACGGAGAATTTGACTTTTGAAGATCTTTATATTGCTGTTTTACTTGTATTCAATGATATCAATAAATTTATTCCCGGTCCCCATTTTGATCCTCCATCAAAACAAAAAGTCAGAGAAATGATGAAGGAATGTGACCTCAACTTGGATGGGCAAATTGATCGGGAAGAATTTTGTGATTTCATCCAGAGAATGTCAGTTGATACATTCAGTGTTGTTAGTCAAAAACTTATTGTCACTTTGGTTGTAGCACCAACAGTTGCAGTGGCAACAAAGAAAGCCACTGAAGGTGTCCCAGGTGTTGGGAGATTGGTGCAAAGGTTACCCAATGCAGCTTATGCATCCCTTGTGACAGTTGCAGCTGTATGGTTCCAAAACATGGGACAGGATTCTCAAAACTAG 501 0.3892 MGQALDKLQGKDWRKRQVRKITDSVFDKIKNQMQTENLTFEDLYIAVLLVFNDINKFIPGPHFDPPSKQKVREMMKECDLNLDGQIDREEFCDFIQRMSVDTFSVVSQKLIVTLVVAPTVAVATKKATEGVPGVGRLVQRLPNAAYASLVTVAAVWFQNMGQDSQN* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00408 166 PANTHER CALCIUM ION-BINDING PROTEIN 1 160 - -
Rops4g00408 166 ProSiteProfiles EF-hand calcium-binding domain profile. 66 101 IPR002048 GO:0005509
Rops4g00408 166 SMART efh_1 70 98 IPR002048 GO:0005509
Rops4g00408 166 Gene3D - 12 111 - -
Rops4g00408 166 Pfam EF-hand domain pair 38 96 IPR002048 GO:0005509
Rops4g00408 166 CDD EFh 64 96 IPR002048 GO:0005509
Rops4g00408 166 SUPERFAMILY EF-hand 38 100 IPR011992 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g00408 1 156 EF-hand Containing Proteins AT1G64850 64.744 3.81e-77 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00408 - - gmx:100526914 250.366