Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00406 ATGCCGCAGCAGCAGCAGCAAAACAGTAACATCCCAGTAAGCGAGGTTTTCTGGACTCTCGTCGATAAAGCCGACAAGAAATTCTCCAAAATCAGAGACTTACCTTACTACCAACGCTCCAGGCATGATACATACTTTTATAAGGTCTTCAAGGTTTACACACAGTTATGGAAGTTTCAACAAGAGAATCGCCAGAAGCTTCTAGAAGCCGGTCTTCGAAGATGGGAGATTGGCGAGATCGCATCTCGAATTGGCCAATTGTATTTCGGTCAATACATGAGGACAAGTGATGCTAATTATTTATCTGAATCGTATATATTCTATGAGGCGATTTTCACTAGGGAATATTTTAAGGAAGGGTTGTTTCAGGATGTGAATATCGCGAATAAGCAATTGAGGTTCCTCGCGAGGTTTATAATGGTGTGTTTGGTTTTGAATCGGAGGGAGATGGTGCAGCAGTTGGTTAATCAGCTTAAACCATTGGTTGATGAATGCAAGAGATCTTTCCAGGAAAGTGACTTTAAAGAATGGAAGCTGGTGGTTCAGGAAATAGTCAGATTTTTAAAAGCTGACACTCCTTTTATGAATATCAGGCCCTTGAGATATAGTCTAGTTTTGGACCCTCATCCCGATACTTTGCCACACGTTGCTGCAGCCATCACAAGGCGAAATTTGAGATTACGAGATGCTGTATTGAGTAGCTTCCATCAAAATGAGGTTAAGTTTTCAGAGCTCACTATTGACACTTTTAGGATGCTTCAATGCTTGGAGTGGGAACCCAGTGGCTCATTTTACCAGTCTAGTGGTTCAAAACTTAGTCAGAATGGGGCAACTGGGGCCAGTCGTATCAGTTACTTACAAGATATTGCTGATCCTACCTTACCAGCAAACCCTCGGAAAGCTATATTATACCGCCCTTCACTGACACATTTTATAGCTGTTCTTGCCACAATTTGTGAGGAGCTTCCTTCTGATGGTATTCTCCTTGTATATTTGTCAGCTTCAGGATCTTGTGGTGCTGCACAGAATGAATCTGGTTGCATACCTTTTGGTCCCCGTGGAGATAGAGGATCAAACTGCATATATCCATCTGACTTTCTACCGTTTACTAGAAGACCACTTCTTTTAGTCATTGATAATGACAACAGCAAAGCTTTTAAGGTCATAGCAGAAGGAGAGAAGGGAGAGTCAGTTGCTATGCTCCTTTCTCCAAGCTGTTCACCTCCTATAGCATCTGATTGCTCACATCATTCAAATGGGAGCCTGTTCACCATGTTTCTTACAGCTCCCCTGCAAGCTTTCTGTCTGCTGCTAGGACTTTCAGGCACTGATATTGATTTGGACATATACAACAAAGCTGAAATACTGCTCTCATCATCATTGAATAACTGGGGACTGGCATTGGCAACATCAGACACACTTGATCCTGTTTGGGGACAGGTTTTAGGTGATCCCTTCATAAGGAGACTTCTGTTGAGATTCATTTTTTGTGAAGGAGTGTTGACCCTGTATGCACCAGTTCACAACAAAAACAAATTCCTTCCAACATGTGTTCCTTCTCTTCCAACACTTGTCCTGCCCTCAAGTTACTCATATGAAAGTGTAGTTCTGCAACTAGCCAGCATTTTTGGTGCAACTAAGCATTTCATCATCTCGGAGAATGTTCTTCCTGAAAATATGAATACAAACGTGGATTAG 1698 0.4211 MPQQQQQNSNIPVSEVFWTLVDKADKKFSKIRDLPYYQRSRHDTYFYKVFKVYTQLWKFQQENRQKLLEAGLRRWEIGEIASRIGQLYFGQYMRTSDANYLSESYIFYEAIFTREYFKEGLFQDVNIANKQLRFLARFIMVCLVLNRREMVQQLVNQLKPLVDECKRSFQESDFKEWKLVVQEIVRFLKADTPFMNIRPLRYSLVLDPHPDTLPHVAAAITRRNLRLRDAVLSSFHQNEVKFSELTIDTFRMLQCLEWEPSGSFYQSSGSKLSQNGATGASRISYLQDIADPTLPANPRKAILYRPSLTHFIAVLATICEELPSDGILLVYLSASGSCGAAQNESGCIPFGPRGDRGSNCIYPSDFLPFTRRPLLLVIDNDNSKAFKVIAEGEKGESVAMLLSPSCSPPIASDCSHHSNGSLFTMFLTAPLQAFCLLLGLSGTDIDLDIYNKAEILLSSSLNNWGLALATSDTLDPVWGQVLGDPFIRRLLLRFIFCEGVLTLYAPVHNKNKFLPTCVPSLPTLVLPSSYSYESVVLQLASIFGATKHFIISENVLPENMNTNVD* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00406 565 PANTHER PROTEIN SCAI 3 343 - -
Rops4g00406 565 Pfam Protein SCAI 352 505 IPR022709 GO:0003714|GO:0006351
Rops4g00406 565 Pfam Protein SCAI 20 343 IPR022709 GO:0003714|GO:0006351
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00406 Rops-Chr4 12099060 12114629 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00406 - - gmx:100801761 1027.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g00406 4 12099060 12114629 Rops4g00406 4 12099060 12114629 ECH