Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00403 ATGGCACAAGTGAGGAACAAGCAAGTGGTTCTAAAGGACCATGTGTCTGGTTTTCCTAAGGAATCTGACATGAACATTGTTGAGAGTACCATAACTCTCAAGCTTCCAGAAGGTTCCAATGAGGTGTTGCTCAAGAATCTATACTTGTCTTGTGATCCATACATGAGGAATCTTATGAACAAGCCAGAAGGCCCTCCCAATCCTCGTGCCTTCACTCCTAACTCTCCATTAGCAGGGTATGGTGTGTCTAAAGTCCTGGAATCTGGACACCCAGATTATACGGAAGGTGATTTAGTTTGGGGCTTTACTAAATGGGAAGAGTACAGCTTGGTCCCTTCAGCTGAGATACTGTTCAAAATTGAGCACACTGATGTCCCACTTTCCTACTATACTGGAATTCTTGGTATGCCAGGAGTGACTGCTTATGCAGGTCTCTTTGAAGTAGGCTCTCTCAAGAAAGGAGAGAATTTTTTTGTTTCAGCTGCCTCTGGTGCAGTTGGTCAACTTGTTGGGCAATTTGCTAAACTGAATGATTGTTATGTTGTTGGAAGTGCTGGAAGTAAAGAGAAGGTGGATCTATTGAAGAATAAATTTGGATTTGATGGAGGTTTCAACTACAAGGAAGAGCCTGACCTCAATGCAGCTTTGAAAAGGCACTTTCCAGAAGGCATTGATGTTTACTTTGAGAATGTTGGGGGCAAGACACTTGATGCTGTACTCCTGAATATGAGAGTCCATGGTCGCATACCCGTCTGTGGAATGATCTCACAGTATAATCTTACTCAACATGAGGGAGTAACAAATTTGGCACACATCATATATAAGAGGGTTCGTATGGAAGGGTTTAATTTCATGGATTTCTATCACCTATATCCTAAATTCTTGGAGTTTGTCCTGCCTCATATCAGAGAAGGGAAAATTGTGTATGTGGAAGACATAGCTGAGGGTCTTGAGAATGGTCCTTCAGCTTTGGTTGGCCTTTTTAGTGGTCGCAATGTTGGTAAACAAGTGCTTGTTGTTGCTCATGAATAA 1032 0.4225 MAQVRNKQVVLKDHVSGFPKESDMNIVESTITLKLPEGSNEVLLKNLYLSCDPYMRNLMNKPEGPPNPRAFTPNSPLAGYGVSKVLESGHPDYTEGDLVWGFTKWEEYSLVPSAEILFKIEHTDVPLSYYTGILGMPGVTAYAGLFEVGSLKKGENFFVSAASGAVGQLVGQFAKLNDCYVVGSAGSKEKVDLLKNKFGFDGGFNYKEEPDLNAALKRHFPEGIDVYFENVGGKTLDAVLLNMRVHGRIPVCGMISQYNLTQHEGVTNLAHIIYKRVRMEGFNFMDFYHLYPKFLEFVLPHIREGKIVYVEDIAEGLENGPSALVGLFSGRNVGKQVLVVAHE* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00403 343 Gene3D - 133 309 - -
Rops4g00403 343 CDD double_bond_reductase_like 4 340 - -
Rops4g00403 343 SMART PKS_ER_names_mod 30 338 IPR020843 GO:0016491
Rops4g00403 343 PANTHER PROSTAGLANDIN REDUCTASE 4 340 IPR045010 GO:0016628
Rops4g00403 343 SUPERFAMILY GroES-like 3 170 IPR011032 -
Rops4g00403 343 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 132 303 IPR036291 -
Rops4g00403 343 Pfam N-terminal domain of oxidoreductase 7 115 IPR041694 -
Rops4g00403 343 FunFam Prostaglandin reductase 2 133 309 - -
Rops4g00403 343 Pfam Zinc-binding dehydrogenase 165 298 IPR013149 -
Rops4g00403 343 Gene3D - 8 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00403 Rops-Chr4 12077616 12084420 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00403 K19825 - gmx:100809668 650.203