Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00385 ATGGCAATCCAAGCATTTCAAGGCTCTTTTTCTTGTTGTTTCCATTCCCACATTCACTCTTCTTCCACAACTGCATCCCCATCAATCCTTGCCACAAGGTGGTTCAAATCATTGGGTTCTTACCCTTCAAGAAAGTCTCTGAAGCTGAATTGCAGTTCAAATGGCAACAATGGGGACCAAGATTATCTGTTAGATGCTCCAGTTTCTGTTGGAGATGGCTTCTCTTTCAGTGGAGGAAAATATTCAGACGGGCCCAGTCCAAGTGATGAATGGTTTAAACAAGGAAAAATGGTTAGAGCCTATTCAATTCCTGGCACTGGTGAAAAGGCAAAAGATCCAATTTTTGGGCTCACTATGGGTGCTGGTTCTCAAGCTACTGGTGATTGTTTCAGATGGTTTTGTGTTGAAAGCGGAGGTGCTGATAATCCTTCAGTGATATTAATCCATGGTTTCCCTTCACAGGCATATTCTTATCGCAAAGTTCTTCCAGTACTCTCCAAGGACTATCATGCCATAGCATTTGACTGGCTAGGATTTGGATTTTCTGATAAGCCTCAACCCAGATATGGGTTTGACTATACACTGGATGAATATGTGTCATCATTGGAGTCACTTATTGATGAGCTCGCTGTTACTAAAGTCTCACTTGTTGTCCAGGGATATTTTTCACCAGTTGTAGTTAAGTATGCCAATAGTCACCAGGAAAAGCTCAACAACTTAATACTCCTTAATCCACCTCTAACAGCCCAACATGCCAAGCTTCCGCCAACATTGTCCATATTCAGCAACTTTCTGCTAGGCGAAATATTTTCACAGGATCCATTAAGGGCCAGTGACAAAGCTCTGACAAGCTGTGGACCCTATAAAATGAAAGAAGAAGATGCCATGGTCTACAGAAGACCCTATCTCACATCTGGTTCCTCAGGCTTTGCACTAAATGCAATTAGCAGGAACATGAAGAAAGACCTCAAGAGGTATGTGGAGGATATGCAGATAATACTTAAGGATAAAAATTGGAAAGTTCGAACCACAATATGTTGGGGCCAAAGAGACCGCTGGTTGAGCTTTGAAGGAGTGGAAGATTTCTGCAAAGCTTCCAACCATCCACTTATTGAAGTCCCAAGGGCAGGTCATCACGTGCAGGAAGATTGTGGTGAAGAACTTGGACAACTTATTTATGGGATAATGCGTAAGAGGAACCTGATATGA 1209 0.4243 MAIQAFQGSFSCCFHSHIHSSSTTASPSILATRWFKSLGSYPSRKSLKLNCSSNGNNGDQDYLLDAPVSVGDGFSFSGGKYSDGPSPSDEWFKQGKMVRAYSIPGTGEKAKDPIFGLTMGAGSQATGDCFRWFCVESGGADNPSVILIHGFPSQAYSYRKVLPVLSKDYHAIAFDWLGFGFSDKPQPRYGFDYTLDEYVSSLESLIDELAVTKVSLVVQGYFSPVVVKYANSHQEKLNNLILLNPPLTAQHAKLPPTLSIFSNFLLGEIFSQDPLRASDKALTSCGPYKMKEEDAMVYRRPYLTSGSSGFALNAISRNMKKDLKRYVEDMQIILKDKNWKVRTTICWGQRDRWLSFEGVEDFCKASNHPLIEVPRAGHHVQEDCGEELGQLIYGIMRKRNLI* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00385 402 Pfam alpha/beta hydrolase fold 143 382 IPR000073 -
Rops4g00385 402 PRINTS Alpha/beta hydrolase fold signature 343 357 IPR000073 -
Rops4g00385 402 PRINTS Alpha/beta hydrolase fold signature 168 183 IPR000073 -
Rops4g00385 402 PRINTS Alpha/beta hydrolase fold signature 230 243 IPR000073 -
Rops4g00385 402 Gene3D alpha/beta hydrolase 122 394 IPR029058 -
Rops4g00385 402 PANTHER HYDROLASE-RELATED 123 393 - -
Rops4g00385 402 SUPERFAMILY alpha/beta-Hydrolases 128 397 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00385 Rops-Chr4 11625022 11633440 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g00385 136 274 Acyl Lipid Metabolism Gene Families AT3G05600 28.205 3.38e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00385 - - gmx:100809126 687.182