Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00383 ATGGCGTTACAGTTTCTGAAGCACCATTCCGTAGTTTTGCAGAGAGAAACATCTTTAACTTTTCTTTCTCACTTACGAAAGCTGATATTCCCAAGCACAGTGAGATGGGTCAATGCTCATATTCCAATTTCTTATAGGAGCTATGCTACTGCAAAATCAGAAAAGATTTTACCAGTGAAGAAGAAAAAGCGGCTGGATGAAATATGCCTTGAAAAATATGAACAATATAGTAGATCCATCATCCAGTCATGGATTTTGCAAGGCAAAGTATATGTGAATGGGAAGGTGATAAATAAAGCTGGTACCCCTGTGTCTGAAAAAGCTGTTGTGCAGATAATGGCTGAAGTTCCCAAATATGTATGTAGAGCTGGACATAAGTTGGAAGCTGCCATTGAACAGCTCGGTGTCGATGTTGCTGGTAAAGTAGCTCTTGATTCTGGACTGTCAACTGGAGGATTTACTGACTGCTTACTTCAGCATGGGGCATCGTATGTTTACGGGGTTGATGTAGGTTATGGACAGGTAGCTGACAAAGTTCGAAGAGATGAACGTGTATCTGTTATAGAGCGGACAAATTTAAGATATCTTGCAGGACTCCCACAAAATGTTGATTTGGTGACCTTAGACCTCTCGTTCATCTCTATTCTTCTGGTTATGCCTGCTGTGGTCAATGTCATGAAGGAAGATGCAGCATTAGTGACCTTGGTTAAACCACAATTTGAAGCTCTCAGATCTCAAGTAGGAAAAGGGGGGATTGTGAAGGATCCCATTGTCCATCAAGAGGTTCTTGAGAAGATTACAAAGGGAGTAGAGAATTTTGGTTTCTGCACTAAAGGTTGGATTGAGTCTCCTCTCAAAGGTGCTGAGGGTAATACGGAATTCCTTGTTCACTTCAAAAGAACCCATAATAGAGGCTCCTGA 921 0.4137 MALQFLKHHSVVLQRETSLTFLSHLRKLIFPSTVRWVNAHIPISYRSYATAKSEKILPVKKKKRLDEICLEKYEQYSRSIIQSWILQGKVYVNGKVINKAGTPVSEKAVVQIMAEVPKYVCRAGHKLEAAIEQLGVDVAGKVALDSGLSTGGFTDCLLQHGASYVYGVDVGYGQVADKVRRDERVSVIERTNLRYLAGLPQNVDLVTLDLSFISILLVMPAVVNVMKEDAALVTLVKPQFEALRSQVGKGGIVKDPIVHQEVLEKITKGVENFGFCTKGWIESPLKGAEGNTEFLVHFKRTHNRGS* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00383 306 Pfam FtsJ-like methyltransferase 119 299 IPR002877 GO:0008168|GO:0032259
Rops4g00383 306 Pfam S4 domain 64 110 IPR002942 GO:0003723
Rops4g00383 306 SMART s4_6 63 128 IPR002942 GO:0003723
Rops4g00383 306 NCBIfam TlyA family rRNA (cytidine-2'-O)-methyltransferase 64 293 IPR004538 -
Rops4g00383 306 CDD S4 63 112 - -
Rops4g00383 306 Gene3D Vaccinia Virus protein VP39 114 306 IPR029063 -
Rops4g00383 306 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 119 301 IPR029063 -
Rops4g00383 306 Gene3D - 52 113 IPR036986 GO:0003723
Rops4g00383 306 PANTHER BACTERIAL HEMOLYSIN-LIKE PROTEIN 58 303 IPR047048 GO:0008168
Rops4g00383 306 ProSiteProfiles S4 RNA-binding domain profile. 63 123 - -
Rops4g00383 306 SUPERFAMILY Alpha-L RNA-binding motif 61 115 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00383 K06442 - gmx:100781303 498.434