Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00358 ATGTTTATAACATTCAGCTTATTTGCTATGGAAGACACGGATTCAGTTGCGAAGCTGATAGATTCTACATCTTCTAAGATAAAACAGCTGCAAAAGGCATTTGCTGAACTTGAAAGTTACCGAGCTGTTACTCTTAACTTGAAATGGAAAGAACTCGAGGAACATTTTCATGGGCTTGAGAAATCCTTGAAGAGGCGCTTTCATGAATTGGAAGACCAAGAAAAAGAGTTTGAAAACAAAACAAGGAAAGCTCGTGAAGTGCTGGAGAAGCGGGAAGCAGATGTTTTTGTCAAGGAGCAAGCCTCACTGCAGAGGCTTCAAGAGAAAAGAGATACTGCTGTATTTGCCATTGTAAATGCTCGGGAAAAGCACAGGAAGGTTTCGTCGAGTGAATTGGCTATTATCTCTAACGGGGTTCAAGGGACACCAGGTTTGGACGAGAAACCAGTGGATTCCGTGTCCATTGCGGCTGAAGGTAACTTGGAAGATGTGAAACGTTCTCCTGAAATCAGAAATGCGGAGTTGATGTCTTATCCAGAGTTGGTAAAATTATGTAAAGAGATGGATGCTGCAGGACTTCACAAATTCATATCTGATAACCGTAAGAACCTTGCTGCTATAAGGGAGGAAATACCGCATGCGATGAGAGCTGCTCCTAATGCTGCCCATTTAGTTTTAGATTCTTTGGAAGGATTTTACGGTATGGAAGTGTCAAGTCAGGATGTAAAGAAGGATGCTAACTTACTGGGTCTTCGCCGAACCTGTATCATGCTGCTGGAATGTCTAAGTGATTTCCTGACCAATTCAGACTCTGCTTCTAATGTAATTTCAGAAGATATCAAGGACAGGGCCAAGGCAGTTGCTGAAGCGTGGAAACCTAGATTGGATGCTCTTGACATGGATGCTAGCAATGGGAATTCCTTGGAGGCTCATGCGTTTTTGCAACTTCTAGCCAGCTTTGGTATTGCCTCTGGTTTTAATGAGGATGAGTTATCTAGGCTAATTCCAATGGTGTCTCGGCGTCGTCAAACTGCTGATTTATGTCGCTGCCTTGGGTTGTCAGAGAAGATGCCTGGTGTAATTGAAGTTTTGGTAAACAGTGGGCGGCAAATTGATGCTGTTAACTTGGCTTTTGCATTTGATCTTACAGAACAGTTTTCACCTGTTCCTTTACTGAAGTCTTACTTGACGGATGCTAAAAAAGCTTCTTCTCCAGTCAAAAGTGTTAACTCATTTCCCACTGCACAGATTGAGGTGAATGAACGAGAGCTGATTGCTCTTAAGGCTGTAATCAAGTGCATTGAAGATCATCAACTTGATGAGCAGTATCCTCTAGAACCTCTCCAGAAACGAATGATCCAACTAGAGAAGGCCAAGGCTGACAAGAAGAGGGAAACTGAAGCGACAAAGCCTCAACCCAAGAGACCCCGTGCCAATGGTGCTGGATATGTTCCCCGTGTGACTAATATCCCTTCCGACAAAACTTCCTATGCTAGAGTTGCTGACAGGTACCCACTGCCGTATGTGTATGACCGATCTTACATGTATCCTGGACCAACAGACAATCATTGCGCCCCACTCTTTGGTTCTGCAACTTATAATGTCTCTCCTAATCCTGGAAATTACTTTGGAAATGGCTATCAGTACCAAGCTACATATCTCCACTAA 1668 0.4335 MFITFSLFAMEDTDSVAKLIDSTSSKIKQLQKAFAELESYRAVTLNLKWKELEEHFHGLEKSLKRRFHELEDQEKEFENKTRKAREVLEKREADVFVKEQASLQRLQEKRDTAVFAIVNAREKHRKVSSSELAIISNGVQGTPGLDEKPVDSVSIAAEGNLEDVKRSPEIRNAELMSYPELVKLCKEMDAAGLHKFISDNRKNLAAIREEIPHAMRAAPNAAHLVLDSLEGFYGMEVSSQDVKKDANLLGLRRTCIMLLECLSDFLTNSDSASNVISEDIKDRAKAVAEAWKPRLDALDMDASNGNSLEAHAFLQLLASFGIASGFNEDELSRLIPMVSRRRQTADLCRCLGLSEKMPGVIEVLVNSGRQIDAVNLAFAFDLTEQFSPVPLLKSYLTDAKKASSPVKSVNSFPTAQIEVNERELIALKAVIKCIEDHQLDEQYPLEPLQKRMIQLEKAKADKKRETEATKPQPKRPRANGAGYVPRVTNIPSDKTSYARVADRYPLPYVYDRSYMYPGPTDNHCAPLFGSATYNVSPNPGNYFGNGYQYQATYLH* 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00358 555 Coils Coil 445 465 - -
Rops4g00358 555 Coils Coil 60 90 - -
Rops4g00358 555 Pfam Frigida-like protein 177 466 IPR012474 -
Rops4g00358 555 PANTHER FRIGIDA-LIKE PROTEIN 3-RELATED 24 479 - -
Rops4g00358 555 MobiDBLite consensus disorder prediction 459 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00358 Rops-Chr4 10742608 10755546 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00358 - - aprc:113851605 926.776