Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00341 ATGGAAGTAAAGGAAGAAAAGAAGAAAGAAAGCATTGAAGTGATCACTGCTATTTACAAAGTTAACCTGCATTGTCCAGAATGTGGGAACAAGATCAAGAAGCATCTCCTGACTACTGAAGGGGTGCATACTGTGGATATAGATTTTGAGAAACGAGAAATCAAGGCAAAAGGGAAAATAGACCCTTTGAAAATCTTGACGCTTATCGAGAAGAAGAGCAAGAAAAAAGTTGAATTAATATCACCAAAAGTGAAGCCTAAGGAGATCCCTCCTGTTGATATAAAGCCAAAGGAAATCAAAGAACCAATTATTCGCACCATCTCGGCGAAGGTTCACATGCATTGTGACAAATGTGAGGCTGACCTTAAACGTAGATTAATAAAGCACAAAGGTATTTTCAATGTTAAAACCGACATGAAAGCTCATACTTTAACAGTTGAAGGTACCATTGAAGAAGAGAAATTGAAATCATTTTTGAGAAAAAGGGTGCATAAAAATGCAGAGATTATTTCCATAAAGGAAGAGAAAAAGGAGGAAAAGAAAGAAAAGGTCAAAGAAGAAGTAAAGATTTCAGAAGCTATCAAAGATAAGGATGGGATTAAGTCTGGTGAACCAACTAAGAAAATAGAAGAAATCAAGTCCAGTGAAACAACCAAAATAATAGAAACTAAAACAAAAGAAGAGATTAAGATAAAAGAAAATGTTCCTTATATCATTCACTATGTCTATGCCCCACAACTTTTCAGCGACGAGAATCCAAATTCTTGCTCTATTTTATAA 780 0.3487 MEVKEEKKKESIEVITAIYKVNLHCPECGNKIKKHLLTTEGVHTVDIDFEKREIKAKGKIDPLKILTLIEKKSKKKVELISPKVKPKEIPPVDIKPKEIKEPIIRTISAKVHMHCDKCEADLKRRLIKHKGIFNVKTDMKAHTLTVEGTIEEEKLKSFLRKRVHKNAEIISIKEEKKEEKKEKVKEEVKISEAIKDKDGIKSGEPTKKIEEIKSSETTKIIETKTKEEIKIKENVPYIIHYVYAPQLFSDENPNSCSIL* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00341 259 ProSiteProfiles Heavy-metal-associated domain profile. 104 167 IPR006121 GO:0046872
Rops4g00341 259 SUPERFAMILY HMA, heavy metal-associated domain 17 74 IPR036163 GO:0046872
Rops4g00341 259 CDD HMA 23 75 IPR006121 GO:0046872
Rops4g00341 259 Gene3D - 11 77 - -
Rops4g00341 259 Coils Coil 167 196 - -
Rops4g00341 259 CDD HMA 112 153 IPR006121 GO:0046872
Rops4g00341 259 ProSiteProfiles Heavy-metal-associated domain profile. 14 77 IPR006121 GO:0046872
Rops4g00341 259 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 7 1 258 IPR044577 GO:0046872
Rops4g00341 259 Gene3D - 105 175 - -
Rops4g00341 259 Pfam Heavy-metal-associated domain 112 164 IPR006121 GO:0046872
Rops4g00341 259 Pfam Heavy-metal-associated domain 20 75 IPR006121 GO:0046872
Rops4g00341 259 SUPERFAMILY HMA, heavy metal-associated domain 105 161 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00341 Rops-Chr4 10150419 10154409 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00341 - - gmx:100783418 300.441