Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00333 ATGTTGCATACAGTGTTGCACGAACCATCTGAACCATTCCCAACATCACAATATGAGCATTCTTCTATTCCTGCAACTGTTAAGAAGATTTTCAATTTACCTGAATGCTTGACAAAGAGGGATGCATGGGCTGCAACTTTTGAGGGCCTCTTAACTCGAACCAGCCCACGAACTGATTGTCCAGTGACATTGCCTGACCCAATCAAACTACGAGAGGCAGCTGCTCAAGAACTAGCCAAATTGAGTGAATTTCAGGAAGAATTGGTACAAATGGCAGCAACTCTAAATGGGGATCATAGAAAGAGTATATACCCCCAACAAGTTGGTTGA 330 0.4303 MLHTVLHEPSEPFPTSQYEHSSIPATVKKIFNLPECLTKRDAWAATFEGLLTRTSPRTDCPVTLPDPIKLREAAAQELAKLSEFQEELVQMAATLNGDHRKSIYPQQVG* 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00333 109 PANTHER NON-SPECIFIC PHOSPHOLIPASE C4-RELATED 3 96 IPR007312 GO:0016788
Rops4g00333 109 Gene3D Alkaline Phosphatase, subunit A 3 84 IPR017850 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00333 Rops-Chr4 9974715 9977973 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g00333 4 101 Acyl Lipid Metabolism Gene Families AT3G03530 64.286 1.07e-38 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00333 K01114 - gmx:100805391 186.422